CoP: Co-expressed Biological Processes

Homology analysis

Gene ID Os08g0492100

Gene name

Functional description Similar to At3g13224: RNA recognition motif (RRM)-containing protein (Ev=5e-8)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.29	0	1203	Os08g0492000	AK100814.1	-	Oligopeptide transporter OPT superfamily protein	6e-21	At5g55930	OPT1 (OLIGOPEPTIDE TRANSPORTER 1)	O.I.	C.G.	S.X.
0.10	5e-47	190	Os08g0320200	AK072608.1	-	Oligopeptide transporter OPT superfamily protein	1e-9	At5g55930	OPT1 (OLIGOPEPTIDE TRANSPORTER 1)	O.I.	C.G.	S.X.
0.09	4e-4	48	Os08g0320100	AK104999.2	-	RNA-binding region RNP-1 (RNA recognition motif)domain containing protein	3e-6	At5g40490	RNA recognition motif (RRM)-containing protein	O.I.	C.G.	S.X.
0.04	1e-10	69	Os04g0594800	AK070801.1	-	Oligopeptide transporter OPT superfamily protein	3e-4	At5g64410	OPT4 (OLIGOPEPTIDE TRANSPORTER 4)	O.I.	C.G.	S.X.
0.02	5e-4	48	Os06g0127700	AK072617.1	-	-	2e-6	At4g10770	OPT7 (OLIGOPEPTIDE TRANSPORTER 7)	O.I.	C.G.	S.X.
0.02	6e-3	44	Os09g0359900	AK105521.1	-	Conserved hypothetical protein	7e-1	At4g14000	unknown protein	O.I.	C.G.	S.X.
0.02	2e-2	42	Os03g0306700	AK109929.1	-	Basic-leucine zipper (bZIP) transcription factordomain containing protein	2e-1	At2g27250	CLV3 (CLAVATA3)	O.I.	C.G.	S.X.
0.02	2e-2	42	Os07g0632800	NM_193100.1	-	Protein kinase domain containing protein	1e-48	At1g14000	VIK (VH1-INTERACTING KINASE)	O.I.	C.G.	S.X.
0.01	5e-4	48	Os03g0751100	BU673383	-	-	5e-28	At4g16370	ATOPT3 (OLIGOPEPTIDE TRANSPORTER)	O.I.	C.G.	S.X.
0.01	5e-4	48	Os06g0127600	AK073855.1	-	Conserved hypothetical protein	2e-6	At4g10770	OPT7 (OLIGOPEPTIDE TRANSPORTER 7)	O.I.	C.G.	S.X.
0.01	6e-3	44	Os10g0509000	CB676092	-	DNA mismatch repair protein MutS, C-terminaldomain containing protein	2e-8	At5g54090	DNA mismatch repair MutS family protein	O.I.	C.G.	S.X.
0.01	2e-2	42	Os08g0500300	AK100141.1	-	Protein phosphatase 2C-like domain containingprotein	1e-9	At1g79630	protein phosphatase 2C family protein / PP2C family protein	O.I.	C.G.	S.X.
0.01	2e-2	42	Os09g0376600	9637.m01798	-	Protein kinase domain containing protein	9e-1	At5g07520	GRP18 (GLYCINE-RICH PROTEIN 18)	O.I.	C.G.	S.X.

Orthologous genes

HF	Ev	BS	Gene ID	Organism	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.04	5e-8	59	At3g13224	Arabidopsis thaliana	820515	RNA recognition motif (RRM)-containing protein	F:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPOFBA	-	-	-	O.I.	C.G.	S.X.
0.03	3e-1	38	GmaAffx.33636.1.S1_at	Glycine max	BU927076	-	-	9e-4	At1g17640	RNA recognition motif (RRM)-containing protein	O.I.	C.G.	S.X.
0.25	4e-38	159	Contig16295_at	Hordeum vulgare	Contig16295	-	-	3e-1	At3g01740	-	O.I.	C.G.	S.X.
0.11	1e-9	65	PtpAffx.201300.1.S1_s_at	Populus trichocarpa	pmrna2582	hypothetical protein	-	1e-34	At3g13224	RNA recognition motif (RRM)-containing protein	O.I.	C.G.	S.X.
0.58	2e-140	500	Ta.5338.1.S1_at	Triticum aestivum	CD453726	-	-	5e-8	At3g13224	RNA recognition motif (RRM)-containing protein	O.I.	C.G.	S.X.
0.11	2e-13	75	1621900_s_at	Vitis vinifera	CD798424	hypothetical protein LOC100246013	-	3e-49	At3g13224	RNA recognition motif (RRM)-containing protein	O.I.	C.G.	S.X.
0.50	6e-132	470	Zm.14455.1.S1_at	Zea mays	CD446715	hypothetical protein LOC100217268	-	5e-5	At5g40490	RNA recognition motif (RRM)-containing protein	O.I.	C.G.	S.X.

Back to the CoP portal site

Back to the KAGIANA project homepage