CoP: Co-expressed Biological Processes

Homology analysis

Gene ID Os08g0154700

Gene name

Functional description Similar to At1g03330: small nuclear ribonucleoprotein D, putative / snRNP core SM-like protein, putative / U6 snRNA-associated Sm-like protein, putative (Ev=9e-24)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.13	2e-6	54	Os02g0255400	NM_196472.1	-	RNA-directed DNA polymerase (Reversetranscriptase) domain containing protein	1e-3	At2g39480	PGP6 (P-GLYCOPROTEIN 6)	O.I.	C.G.	S.X.
0.08	5e-7	56	Os01g0140300	NM_184293.1	-	-	6e-1	At3g11110	zinc finger (C3HC4-type RING finger) family protein	O.I.	C.G.	S.X.
0.07	3e-5	50	Os04g0412150	9632.m03223	-	-	1e+0	At3g56260	unknown protein	O.I.	C.G.	S.X.
0.04	8e-9	61	Os06g0141800	AK107277.1	-	Conserved hypothetical protein	6e-1	At3g49300	proline-rich family protein	O.I.	C.G.	S.X.
0.04	6e-8	59	Os04g0165500	AK105123.1	-	Conserved hypothetical protein	4e-1	At1g29850	double-stranded DNA-binding family protein	O.I.	C.G.	S.X.
0.04	2e-6	54	Os07g0231900	AK105271.1	-	Peptidase, trypsin-like serine and cysteineproteases domain containing protein	2e-1	At5g42990	UBC18 (ubiquitin-conjugating enzyme 18)	O.I.	C.G.	S.X.
0.03	6e-5	50	Os02g0317400	AK061254.1	-	Clathrin adaptor complex, small chain familyprotein	5e-4	At4g08520	clathrin adaptor complex small chain family protein	O.I.	C.G.	S.X.
0.03	6e-5	50	Os09g0413000	AK062467.1	-	Hypothetical protein	8e-4	At2g02960	zinc finger (C3HC4-type RING finger) family protein	O.I.	C.G.	S.X.
0.02	6e-5	50	Os10g0316400	AK102018.1	-	Conserved hypothetical protein	4e-2	At5g60500	undecaprenyl pyrophosphate synthetase family protein / UPP synthetase family protein	O.I.	C.G.	S.X.
0.02	4e-3	44	Os11g0271100	AK068981.1	-	Protein kinase domain containing protein	5e-86	At5g19010	MPK16	O.I.	C.G.	S.X.
0.01	4e-3	44	Os01g0103800	AK102782.1	-	Conserved hypothetical protein	2e-2	At1g76660	-	O.I.	C.G.	S.X.

Orthologous genes

HF	Ev	BS	Gene ID	Organism	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.15	9e-24	111	At1g03330	Arabidopsis thaliana	839526	small nuclear ribonucleoprotein D, putative / snRNP core SM-like protein, putative / U6 snRNA-associated Sm-like protein, putative	F:molecular_function unknown;P:unknown;C:small nucleolar ribonucleoprotein complex, nucleus;MFOPA	-	-	-	O.I.	C.G.	S.X.
0.10	3e-9	63	Gma.2161.1.S1_a_at	Glycine max	CD404355	-	-	3e-20	At1g03330	small nuclear ribonucleoprotein D, putative / snRNP core SM-like protein, putative / U6 snRNA-associated Sm-like protein, putative	O.I.	C.G.	S.X.
0.33	2e-88	325	Contig9416_at	Hordeum vulgare	Contig9416	-	-	1e-19	At1g03330	small nuclear ribonucleoprotein D, putative / snRNP core SM-like protein, putative / U6 snRNA-associated Sm-like protein, putative	O.I.	C.G.	S.X.
0.12	3e-27	123	PtpAffx.21967.1.A1_at	Populus trichocarpa	CV236752	hypothetical protein	-	1e-44	At1g03330	small nuclear ribonucleoprotein D, putative / snRNP core SM-like protein, putative / U6 snRNA-associated Sm-like protein, putative	O.I.	C.G.	S.X.
0.36	3e-82	305	TaAffx.113221.1.S1_at	Triticum aestivum	CA617162	-	-	1e-18	At1g03330	small nuclear ribonucleoprotein D, putative / snRNP core SM-like protein, putative / U6 snRNA-associated Sm-like protein, putative	O.I.	C.G.	S.X.
0.21	4e-11	67	1620432_s_at	Vitis vinifera	CB974173	hypothetical protein LOC100249484	-	5e-40	At1g03330	small nuclear ribonucleoprotein D, putative / snRNP core SM-like protein, putative / U6 snRNA-associated Sm-like protein, putative	O.I.	C.G.	S.X.
0.29	1e-85	315	Zm.16342.1.S1_at	Zea mays	CO526291	-	-	5e-7	At1g03330	small nuclear ribonucleoprotein D, putative / snRNP core SM-like protein, putative / U6 snRNA-associated Sm-like protein, putative	O.I.	C.G.	S.X.

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