Homology analysis

Gene ID Os07g0664100
Gene name
Functional description Similar to At3g51880: HMGB1 (HIGH MOBILITY GROUP B 1) (Ev=1e+0)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.147e-146519Os07g06640009635.m04718-Short-chain dehydrogenase/reductase SDR familyprotein2e+0At1g14900HMGA (HIGH MOBILITY GROUP A)O.I.C.G.S.X.
0.141e-85319Os07g06639009635.m04717-Short-chain dehydrogenase/reductase SDR familyprotein2e+0At5g44450methyltransferaseO.I.C.G.S.X.
0.131e-97359Os12g0260500AU184051-Short-chain dehydrogenase/reductase SDR familyprotein2e+0At5g56860GNC (GATA, nitrate-inducible, carbon metabolism-involved)O.I.C.G.S.X.
0.124e-67258Os07g0663700AK107619.1-Short-chain dehydrogenase/reductase SDR familyprotein3e+0At3g51680short-chain dehydrogenase/reductase (SDR) family proteinO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.011e+036At3g51880Arabidopsis thaliana824351HMGB1 (HIGH MOBILITY GROUP B 1)Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha. In interphase cells, HMGB1 is found throughout the nucleus, whereas in mitotic cells it is not chromatin-associated.---O.I.C.G.S.X.
0.032e-346PsAffx.CL1410Contig1_atGlycine maxPsAffx.CL1410Contig1--8e+0At5g42785unknown proteinO.I.C.G.S.X.
0.109e-56218Contig4527_x_atHordeum vulgareContig4527--9e+0At5g41700UBC8 (UBIQUITIN CONJUGATING ENZYME 8)O.I.C.G.S.X.
0.025e-138Ptp.6614.1.S1_atPopulus trichocarpaDN490337hypothetical protein-4e-2At3g26760short-chain dehydrogenase/reductase (SDR) family proteinO.I.C.G.S.X.
0.131e-47192TaAffx.4927.1.S1_atTriticum aestivumCA728433--4e+0At1g69920ATGSTU12 (GLUTATHIONE S-TRANSFERASE TAU 12)O.I.C.G.S.X.
0.021e-4481618595_atVitis viniferaBQ798258hypothetical protein LOC100248440-5e-1At4g10950GDSL-motif lipase/hydrolase family proteinO.I.C.G.S.X.
0.013e-344Zm.3454.1.S1_atZea maysAW282335sex determination protein tasselseed-2-3e+0At2g27130protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.C.G.S.X.



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