CoP: Co-expressed Biological Processes

Homology analysis

Gene ID Os06g0717200

Gene name

Functional description Similar to At3g49670: BAM2 (BARELY ANY MERISTEM 2) (Ev=7e-12)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.17	5e-67	258	Os03g0228800	AK121286.1	-	Protein kinase domain containing protein	3e-17	At3g49670	BAM2 (BARELY ANY MERISTEM 2)	O.I.	C.G.	S.X.
0.17	8e-41	171	Os11g0233800	9639.m01209	-	Protein kinase family protein	1e-16	At3g49670	BAM2 (BARELY ANY MERISTEM 2)	O.I.	C.G.	S.X.
0.12	1e-18	97	Os05g0169600	9633.m00690	-	Protein kinase domain containing protein	4e-4	At4g04510	protein kinase family protein	O.I.	C.G.	S.X.
0.09	4e-15	85	Os08g0376300	AK072348.1	-	Protein kinase domain containing protein	4e-7	At3g13065	SRF4 (STRUBBELIG-RECEPTOR FAMILY 4)	O.I.	C.G.	S.X.
0.09	1e-14	83	Os12g0632900	AK071957.1	-	Receptor protein kinase	3e-5	At5g49660	leucine-rich repeat transmembrane protein kinase, putative	O.I.	C.G.	S.X.
0.09	2e-13	79	Os07g0498400	NM_187384.1	-	Protein kinase domain containing protein	5e-10	At4g20140	GSO1 (GASSHO1)	O.I.	C.G.	S.X.
0.07	2e-17	93	Os11g0232100	AK105669.1	-	Protein kinase domain containing protein	7e-3	At1g72180	leucine-rich repeat transmembrane protein kinase, putative	O.I.	C.G.	S.X.
0.03	1e-14	83	Os06g0654600	9634.m04302	-	Protein kinase domain containing protein	4e-5	At3g55880	unknown protein	O.I.	C.G.	S.X.

Orthologous genes

HF	Ev	BS	Gene ID	Organism	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.06	7e-12	73	At3g49670	Arabidopsis thaliana	824129	BAM2 (BARELY ANY MERISTEM 2)	Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. Very similar to BAM1,with more than 85% a.a. identity. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. Anthers of double mutants (bam1bam2) appeared abnormal at a very early stage and lack the endothecium, middle, and tapetum layers. Further analyses revealed that cells interior to the epidermis (in anther tissue) acquire some characteristics of pollen mother cells (PMCs), suggesting defects in cell fate specification. The pollen mother-like cells degenerate before the completion of meiosis, suggesting that these cells are defective. In addition, the BAM2 expression pattern supports both an early role in promoting somatic cell fates and a subsequent function in the PMCs.	-	-	-	O.I.	C.G.	S.X.
0.09	3e-15	85	Gma.8483.1.S1_at	Glycine max	AF197947.1	receptor protein kinase-like protein	-	3e-8	At1g75820	CLV1 (CLAVATA 1)	O.I.	C.G.	S.X.
0.17	3e-34	147	Contig10767_at	Hordeum vulgare	Contig10767	-	-	3e-15	At3g49670	BAM2 (BARELY ANY MERISTEM 2)	O.I.	C.G.	S.X.
0.06	1e-7	59	PtpAffx.201597.1.S1_at	Populus trichocarpa	pmrna3143	hypothetical protein	-	2e-27	At1g75820	CLV1 (CLAVATA 1)	O.I.	C.G.	S.X.
0.10	6e-28	127	TaAffx.109207.1.S1_at	Triticum aestivum	CA678684	-	-	3e-4	At3g49670	BAM2 (BARELY ANY MERISTEM 2)	O.I.	C.G.	S.X.
0.08	2e-21	103	1616189_at	Vitis vinifera	CF511570	hypothetical protein LOC100260741	-	6e-18	At1g75820	CLV1 (CLAVATA 1)	O.I.	C.G.	S.X.
0.15	7e-35	149	Zm.1140.1.S1_at	Zea mays	BM073428	hypothetical protein LOC100279272	-	4e-14	At3g49670	BAM2 (BARELY ANY MERISTEM 2)	O.I.	C.G.	S.X.

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