Homology analysis

Gene ID Os03g0162300
Gene name
Functional description Similar to At2g21660: CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2) (Ev=4e-1)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.215e-27123Os01g08998009629.m06698-ANT (Ovule development protein aintegumenta)6e-30At1g51190PLT2 (PLETHORA 2)O.I.C.G.S.X.
0.094e-654Os09g0470400NM_192264.1--8e-1At3g09480histone H2B, putativeO.I.C.G.S.X.
0.072e-861Os11g03089009639.m01910--1e+1At5g6067060S ribosomal protein L12 (RPL12C)O.I.C.G.S.X.
0.042e-861Os07g0162700AK110810.1-Esterase/lipase/thioesterase domain containingprotein3e+0At1g68620hydrolaseO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.034e-136At2g21660Arabidopsis thaliana816705CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2)Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).---O.I.C.G.S.X.
0.022e-138PsAffx.C70000004_atGlycine maxPsAffx.C70000004--1e-1At1g70895CLE17 (CLAVATA3/ESR-RELATED 17)O.I.C.G.S.X.
0.032e-136HB31P17r_atHordeum vulgareHB31P17r--3e+0At3g53990universal stress protein (USP) family proteinO.I.C.G.S.X.
0.034e-240PtpAffx.7885.3.S1_atPopulus trichocarpaBU836787hypothetical protein-5e-5At5g26360chaperonin, putativeO.I.C.G.S.X.
0.035e-136Ta.8444.1.A1_atTriticum aestivumBQ161906--3e+0At3g60010ASK13 (ARABIDOPSIS SKP1-LIKE 13)O.I.C.G.S.X.
0.025e-1341621212_atVitis viniferaBQ794170hypothetical protein LOC100260205-7e-5At4g12790ATP-binding family proteinO.I.C.G.S.X.
0.032e-136Zm.5797.2.A1_a_atZea maysBE050459ultraviolet-B-repressible protein-9e-5At2g06520PSBX (photosystem II subunit X)O.I.C.G.S.X.

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