Homology analysis

Gene ID Os02g0771100
Gene name
Functional description Similar to At2g32950: COP1 (CONSTITUTIVE PHOTOMORPHOGENIC 1) (Ev=3e-29)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.013e-346Os09g0485600AK063705.1-The start codon is not identified.5e-3At1g08290zinc finger (C2H2 type) protein (WIP3)O.I.C.G.S.X.
0.011e-244Os03g0643700AK110550.1-Glutathione transferase (EC 2.5.1.18)9e+0At4g21970unknown proteinO.I.C.G.S.X.
0.011e-244Os07g0598400AK072279.1-Glycoside hydrolase, family 79, N-terminal domaincontaining protein2e-1At5g34940AtGUS3 (Arabidopsis thaliana glucuronidase 3)O.I.C.G.S.X.
0.011e-244Os12g0285600AK069104.1-Oxysterol-binding protein family protein3e-26At1g13170ORP1D (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1D)O.I.C.G.S.X.
0.014e-242Os10g0485300CF312665-Conserved hypothetical protein2e-5At1g27510-O.I.C.G.S.X.
0.012e-140Os12g02357009640.m01285-Protein kinase domain containing protein8e-1At3g17160unknown proteinO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.253e-29131At2g32950Arabidopsis thaliana817857COP1 (CONSTITUTIVE PHOTOMORPHOGENIC 1)Represses photomorphogenesis and induces skotomorphogenesis in the dark. Contains a ring finger zinc-binding motif, a coiled-coil domain, and several WD-40 repeats, similar to G-beta proteins. The C-terminus has homology to TAFII80, a subunit of the TFIID component of the RNA polymerase II of Drosophila. Nuclear localization in the dark and cytoplasmic in the light.---O.I.C.G.S.X.
0.222e-1999GmaAffx.74298.1.S1_atGlycine maxBI471684--2e-94At2g32950COP1 (CONSTITUTIVE PHOTOMORPHOGENIC 1)O.I.C.G.S.X.
0.5301211Contig4365_atHordeum vulgareContig4365--5e-39At2g32950COP1 (CONSTITUTIVE PHOTOMORPHOGENIC 1)O.I.C.G.S.X.
0.314e-54214PtpAffx.102.1.A1_atPopulus trichocarpaCV257730hypothetical protein-1e-82At2g32950COP1 (CONSTITUTIVE PHOTOMORPHOGENIC 1)O.I.C.G.S.X.
0.191e-108395Ta.26673.1.A1_atTriticum aestivumCD491535--1e-9At2g32950COP1 (CONSTITUTIVE PHOTOMORPHOGENIC 1)O.I.C.G.S.X.
0.011e-1381616806_atVitis viniferaCF605749hypothetical protein LOC100259004-6e-2At2g01340unknown proteinO.I.C.G.S.X.
0.016e-136Zm.9719.1.A1_atZea maysBM332935hypothetical protein LOC100273981-1e+0At4g0081060S acidic ribosomal protein P1 (RPP1B)O.I.C.G.S.X.



Back to the CoP portal site

Back to the KAGIANA project homepage