CoP: Co-expressed Biological Processes

Homology analysis

Gene ID Os01g0834700

Gene name

Functional description Similar to At2g20280: zinc finger (CCCH-type) family protein (Ev=9e-10)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.04	1e+0	34	Os06g0493100	AY256682.1	-	Hypothetical protein	1e+0	At5g38950	germin-like protein-related	O.I.	C.G.	S.X.
0.04	5e+0	32	Os07g0245801	9635.m01414	-	-	3e-1	At1g48770	unknown protein	O.I.	C.G.	S.X.
0.03	7e-6	54	Os08g0485500	AF069773.1	-	Hypothetical protein	1e-1	At4g09270	unknown protein	O.I.	C.G.	S.X.
0.03	2e-2	42	Os02g0159300	9630.m00575	-	-	7e-9	At1g15270	-	O.I.	C.G.	S.X.
0.02	2e-6	56	Os01g0723600	AK109735.1	-	Phosphoribosyl pyrophosphate synthase isozyme 3precursor (EC 2.7.6.1)	9e-10	At1g10700	ribose-phosphate pyrophosphokinase 3 / phosphoribosyl diphosphate synthetase 3 (PRS3)	O.I.	C.G.	S.X.
0.02	2e-6	56	Os01g0900800	AK068254.1	-	Basic helix-loop-helix dimerisation region bHLHdomain containing protein	4e-18	At2g43140	DNA binding / transcription factor	O.I.	C.G.	S.X.
0.02	9e-5	50	Os05g0168700	AK065618.1	-	Conserved hypothetical protein	6e-42	At1g06890	transporter-related	O.I.	C.G.	S.X.
0.02	1e-3	46	Os07g0479100	AK067434.1	-	The start codon is not identified.	5e-1	At3g28630	-	O.I.	C.G.	S.X.
0.02	6e-3	44	Os02g0556800	AK100187.1	-	Conserved hypothetical protein	3e-2	At1g04445	zinc finger (C2H2 type) family protein	O.I.	C.G.	S.X.
0.02	6e-3	44	Os12g0636000	AK062128.1	-	Zn-finger, RING domain containing protein	4e-2	At4g27470	zinc finger (C3HC4-type RING finger) family protein	O.I.	C.G.	S.X.
0.01	2e-6	56	Os07g0690800	9635.m04962	-	-	3e-1	At1g47380	protein phosphatase 2C-related / PP2C-related	O.I.	C.G.	S.X.
0.01	7e-6	54	Os06g0119100	AK065857.1	-	Protein of unknown function DUF594 family protein	3e-1	At4g12050	DNA-binding protein-related	O.I.	C.G.	S.X.
0.01	6e-3	44	Os02g0142300	AK067944.1	-	Splicing factor 3B subunit 1 (Spliceosomeassociated protein 155) (SAP 155) (SF3b155) (Pre-mRNAsplicing factor SF3b 155 kDa subunit) (146 kDa nuclearprotein)	2e-74	At5g64270	splicing factor, putative	O.I.	C.G.	S.X.
0.01	1e+0	34	Os01g0273500	AK069401.1	-	Heat shock protein DnaJ, N-terminal domaincontaining protein	1e-8	At2g41520	DNAJ heat shock N-terminal domain-containing protein	O.I.	C.G.	S.X.
0.01	1e+0	34	Os09g0516900	AK067607.1	-	C2 domain containing protein	3e-16	At3g59660	C2 domain-containing protein / GRAM domain-containing protein	O.I.	C.G.	S.X.

Orthologous genes

HF	Ev	BS	Gene ID	Organism	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.23	9e-10	65	At2g20280	Arabidopsis thaliana	816547	zinc finger (CCCH-type) family protein	F:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MOFPVBA	-	-	-	O.I.	C.G.	S.X.
0.36	6e-21	103	GmaAffx.30088.1.S1_at	Glycine max	AW734985	-	-	1e-54	At2g20280	zinc finger (CCCH-type) family protein	O.I.	C.G.	S.X.
0.63	0	1029	Contig10041_at	Hordeum vulgare	Contig10041	-	-	8e-29	At2g20280	zinc finger (CCCH-type) family protein	O.I.	C.G.	S.X.
0.41	7e-33	143	PtpAffx.207661.1.S1_s_at	Populus trichocarpa	pmrna15206	hypothetical protein	-	4e-70	At2g20280	zinc finger (CCCH-type) family protein	O.I.	C.G.	S.X.
0.61	1e-141	504	Ta.5934.1.S1_at	Triticum aestivum	CD888662	-	-	4e-15	At2g20280	zinc finger (CCCH-type) family protein	O.I.	C.G.	S.X.
0.36	1e-21	103	1609200_at	Vitis vinifera	CF513119	hypothetical protein LOC100263325	-	7e-49	At2g20280	zinc finger (CCCH-type) family protein	O.I.	C.G.	S.X.
0.63	0	1164	Zm.5544.1.A1_at	Zea mays	AI746165	nucleic acid binding protein	-	4e-43	At2g20280	zinc finger (CCCH-type) family protein	O.I.	C.G.	S.X.

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