CoP: Co-expressed Biological Processes

Homology analysis

Gene ID GmaAffx.92911.1.S1_at

Gene name Transcription factor TFIIB

Functional description Similar to At3g10330: transcription initiation factor IIB-2 / general transcription factor TFIIB-2 (TFIIB2) (Ev=7e-45)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.60	0	1067	Gma.5981.1.S1_s_at	U31097.1	transcription factor TFIIB	-	1e-57	At3g10330	transcription initiation factor IIB-2 / general transcription factor TFIIB-2 (TFIIB2)	O.I.	C.G.	S.X.
0.04	6e-6	52	GmaAffx.91695.1.S1_at	CF807420	transcription factor TFIIB	-	3e-41	At3g10330	transcription initiation factor IIB-2 / general transcription factor TFIIB-2 (TFIIB2)	O.I.	C.G.	S.X.
0.01	4e-1	36	PsAffx.C38000044_at	PsAffx.C38000044	-	-	1e+0	At2g41630	TFIIB (TRANSCRIPTION FACTOR II B)	O.I.	C.G.	S.X.
0.03	2e+0	34	GmaAffx.90865.1.S1_s_at	CF806590	calnexin	-	1e-87	At5g07340	calnexin, putative	O.I.	C.G.	S.X.
0.03	2e+0	34	GmaAffx.60482.1.S1_at	BQ296523	-	-	2e-18	At1g07180	NDA1 (ALTERNATIVE NAD(P)H DEHYDROGENASE 1)	O.I.	C.G.	S.X.
0.02	2e+0	34	Gma.7143.1.S1_at	BI702282	-	-	2e+0	At2g21650	MEE3 (MATERNAL EFFECT EMBRYO ARREST 3)	O.I.	C.G.	S.X.
0.01	2e+0	34	Gma.6427.1.S1_x_at	U20502.1	calnexin	-	8e-94	At5g07340	calnexin, putative	O.I.	C.G.	S.X.
0.01	6e+0	32	PsAffx.C5000005_at	PsAffx.C5000005	-	-	6e-1	At1g71190	SAG18 (SENESCENCE ASSOCIATED GENE 18)	O.I.	C.G.	S.X.
0.01	6e+0	32	PsAffx.C112000016_at	PsAffx.C112000016	-	-	5e-1	At5g14440	-	O.I.	C.G.	S.X.

Orthologous genes

HF	Ev	BS	Gene ID	Organism	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.46	7e-45	180	At3g10330	Arabidopsis thaliana	820195	transcription initiation factor IIB-2 / general transcription factor TFIIB-2 (TFIIB2)	F:protein binding, RNA polymerase II transcription factor activity, transcription regulator activity, zinc ion binding, translation initiation factor activity;P:translational initiation, regulation of transcription, DNA-dependent, transcription initiation, regulation of transcription;C:nucleus, cytoplasm;OAMFPV	-	-	-	O.I.	C.G.	S.X.
0.08	2e-10	65	Contig7364_at	Hordeum vulgare	Contig7364	-	-	5e-13	At3g10330	transcription initiation factor IIB-2 / general transcription factor TFIIB-2 (TFIIB2)	O.I.	C.G.	S.X.
0.24	2e-19	97	Os09g0534800	Oryza sativa	AF464908.1	-	-	4e-5	At3g10330	transcription initiation factor IIB-2 / general transcription factor TFIIB-2 (TFIIB2)	O.I.	C.G.	S.X.
0.52	5e-68	258	PtpAffx.5269.2.A1_a_at	Populus trichocarpa	CV239041	hypothetical protein	-	6e-59	At3g10330	transcription initiation factor IIB-2 / general transcription factor TFIIB-2 (TFIIB2)	O.I.	C.G.	S.X.
0.06	3e-10	65	Ta.3891.1.S1_at	Triticum aestivum	CK200281	-	-	8e-7	At2g41630	TFIIB (TRANSCRIPTION FACTOR II B)	O.I.	C.G.	S.X.
0.52	9e-88	321	1618932_s_at	Vitis vinifera	CA815730	hypothetical protein LOC100267614	-	6e-65	At3g10330	transcription initiation factor IIB-2 / general transcription factor TFIIB-2 (TFIIB2)	O.I.	C.G.	S.X.
0.08	5e-13	73	Zm.12970.1.A1_at	Zea mays	CO049279	hypothetical protein LOC100193219	-	7e-7	At3g10330	transcription initiation factor IIB-2 / general transcription factor TFIIB-2 (TFIIB2)	O.I.	C.G.	S.X.

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