CoP: Co-expressed Biological Processes

Homology analysis

Gene ID GmaAffx.90608.1.S1_s_at

Gene name

Functional description Similar to At4g15900: PRL1 (PLEIOTROPIC REGULATORY LOCUS 1) (Ev=5e-102)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
1.00	0	1348	GmaAffx.90608.1.S1_at	CF806333	-	-	5e-102	At4g15900	PRL1 (PLEIOTROPIC REGULATORY LOCUS 1)	O.I.	C.G.	S.X.
0.66	0	1193	GmaAffx.26700.1.S1_at	BI094913	-	-	5e-85	At4g15900	PRL1 (PLEIOTROPIC REGULATORY LOCUS 1)	O.I.	C.G.	S.X.
0.04	2e-19	97	Gma.11067.1.S1_at	BG839085	alanine aminotransferase 3	-	7e-101	At1g23310	GGT1 (GLUTAMATE:GLYOXYLATE AMINOTRANSFERASE)	O.I.	C.G.	S.X.
0.04	2e-19	97	Gma.11067.1.S1_a_at	BG839085	alanine aminotransferase 2 /// alanine aminotransferase 3	-	7e-101	At1g23310	GGT1 (GLUTAMATE:GLYOXYLATE AMINOTRANSFERASE)	O.I.	C.G.	S.X.
0.01	5e-1	36	PsAffx.C59000022_at	PsAffx.C59000022	-	-	2e+0	At1g09245	-	O.I.	C.G.	S.X.
0.02	2e+0	34	GmaAffx.14675.1.S1_at	BM891395	-	-	1e-2	At5g39410	binding / catalytic	O.I.	C.G.	S.X.
0.03	2e+0	34	Gma.2552.1.S1_at	BU577266	-	-	3e-1	At2g18370	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	O.I.	C.G.	S.X.
0.01	7e+0	32	PsAffx.C95000062_at	PsAffx.C95000062	-	-	6e-1	At5g60340	maoC-like dehydratase domain-containing protein	O.I.	C.G.	S.X.
0.01	7e+0	32	PsAffx.C82000024_at	PsAffx.C82000024	-	-	2e+0	At5g28780	unknown protein	O.I.	C.G.	S.X.

Orthologous genes

HF	Ev	BS	Gene ID	Organism	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.	Other DB
0.50	5e-102	371	At4g15900	Arabidopsis thaliana	827272	PRL1 (PLEIOTROPIC REGULATORY LOCUS 1)	Mutations confer hypersensitivity to glucose and sucrose and augments sensitivity to cytokinin, ethylene, ABA and auxin. Encodes a nuclear WD40 protein that is imported into the nucleus. Essential for plant innate immunity. Interacts with MOS4 and AtCDC5. It is also predicted to have two DWD motifs. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase, and may affect the stability of AKIN10.	-	-	-	O.I.	C.G.	S.X.
0.23	3e-18	91	Contig17157_at	Hordeum vulgare	Contig17157	-	-	2e-14	At4g15900	PRL1 (PLEIOTROPIC REGULATORY LOCUS 1)	O.I.	C.G.	S.X.
0.27	2e-28	127	Os03g0339100	Oryza sativa	AK111641.1	-	PP1/PP2A phosphatases pleiotropic regulator PRL2	2e-17	At4g15900	PRL1 (PLEIOTROPIC REGULATORY LOCUS 1)	O.I.	C.G.	S.X.
0.46	7e-139	494	Ptp.6543.1.S1_s_at	Populus trichocarpa	CV233854	hypothetical protein	-	2e-121	At4g15900	PRL1 (PLEIOTROPIC REGULATORY LOCUS 1)	O.I.	C.G.	S.X.
0.36	1e-28	127	Ta.6105.1.S1_at	Triticum aestivum	CK192946	-	-	3e-22	At4g15900	PRL1 (PLEIOTROPIC REGULATORY LOCUS 1)	O.I.	C.G.	S.X.
0.03	2e+0	32	1622853_at	Vitis vinifera	CF607037	similar to Histone-lysine N-methyltransferase ATX2	-	4e+0	At2g47780	rubber elongation factor (REF) protein-related	O.I.	C.G.	S.X.
0.26	9e-37	153	Zm.6454.1.A1_at	Zea mays	AY106137.1	PP1/PP2A phosphatases pleiotropic regulator PRL1	-	9e-29	At4g15900	PRL1 (PLEIOTROPIC REGULATORY LOCUS 1)	O.I.	C.G.	S.X.

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