Homology analysis

Gene ID GmaAffx.9006.2.S1_at
Gene name
Functional description Similar to At4g24540: AGL24 (AGAMOUS-LIKE 24) (Ev=2e-4)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.082e-550GmaAffx.79004.1.S1_atBU761215MADS-box protein-2e-17At4g18960AG (AGAMOUS)O.I.C.G.S.X.
0.151e-344GmaAffx.76494.1.S1_atAW309024--7e-20At2g03710SEP4 (SEPALLATA 4)O.I.C.G.S.X.
0.042e-240GmaAffx.73009.2.S1_atBI321576WRKY61 protein-6e-3At2g21900WRKY59O.I.C.G.S.X.
0.082e-240Gma.16618.1.S1_atBE330897SOC1-4e-12At2g45660AGL20 (AGAMOUS-LIKE 20)O.I.C.G.S.X.
0.013e-136PsAffx.C20000073_atPsAffx.C20000073--4e-1At4g02890UBQ14O.I.C.G.S.X.
0.011e+034PsAffx.C4000123_atPsAffx.C4000123--3e-1At1g32150bZIP transcription factor family proteinO.I.C.G.S.X.
0.081e+034GmaAffx.57956.1.S1_atBQ454007--1e-33At5g60910AGL8 (agamous-like 8)O.I.C.G.S.X.
0.071e+034GmaAffx.55740.1.S1_atBI497772--4e-6At2g22540SVP (SHORT VEGETATIVE PHASE)O.I.C.G.S.X.
0.041e+034Gma.15776.1.A1_atCD401640--8e-1At1g15165U-box domain-containing proteinO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.182e-446At4g24540Arabidopsis thaliana828556AGL24 (AGAMOUS-LIKE 24)Encodes a MADS-box protein involved in flowering. Regulates the expression of SOC1 and is also upregulated by SOC1. Binds with IMK3 kinase domain. Phosphorylated by IMK3; likely to be a target for IMK3 kinase domain.---O.I.C.G.S.X.
0.054e-134HVSMEf0010N18r2_atHordeum vulgareHVSMEf0010N18r2--7e+0At5g60950COBL5 (COBRA-LIKE PROTEIN 5 PRECURSOR)O.I.C.G.S.X.
0.154e-136OsAffx.12789.1.A1_atOryza sativa---0O.I.C.G.S.X.
0.142e-23109Ptp.2578.1.S1_atPopulus trichocarpaAY501392.1MADS9, AGL24 mads-box transcription factor-2e-28At4g24540AGL24 (AGAMOUS-LIKE 24)O.I.C.G.S.X.
0.041e+130TaAffx.64486.1.A1_atTriticum aestivumBJ295278--3e+0At2g38880NF-YB1 (NUCLEAR FACTOR Y, SUBUNIT B1)O.I.C.G.S.X.
0.076e-2361619977_atVitis viniferaBQ794993hypothetical protein LOC100251508-3e-27At2g22540SVP (SHORT VEGETATIVE PHASE)O.I.C.G.S.X.
0.056e-340Zm.14827.1.S1_atZea maysAJ430635.1m21 protein-1e-1At1g28200FIP1 (FH INTERACTING PROTEIN 1)O.I.C.G.S.X.



Back to the CoP portal site

Back to the KAGIANA project homepage