Homology analysis

Gene ID GmaAffx.36250.1.S1_s_at
Gene name
Functional description Similar to At5g62520: SRO5 (SIMILAR TO RCD ONE 5) (Ev=2e-1)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.850835GmaAffx.93046.1.S1_atCF808771--3e-1At5g62520SRO5 (SIMILAR TO RCD ONE 5)O.I.C.G.S.X.
0.041e+034HgAffx.21008.1.S1_atBI748745--3e+0At5g18407-O.I.C.G.S.X.
0.015e+032PsAffx.C97000051_atPsAffx.C97000051--3e-1At4g25930unknown proteinO.I.C.G.S.X.
0.025e+032PsAffx.C47000073_atPsAffx.C47000073--4e+0At1g20140ASK4 (ARABIDOPSIS SKP1-LIKE 4)O.I.C.G.S.X.
0.045e+032PsAffx.C34000081_atPsAffx.C34000081--3e+0At5g55507hydroxyproline-rich glycoprotein family proteinO.I.C.G.S.X.
0.005e+032PsAffx.C258000003_atPsAffx.C258000003--8e-2At4g12740adenine-DNA glycosylase-related / MYH-relatedO.I.C.G.S.X.
0.015e+032PsAffx.C25000105_s_atPsAffx.C25000105--1e-1At5g66080protein phosphatase 2C family protein / PP2C family proteinO.I.C.G.S.X.
0.015e+032PsAffx.C23000015_atPsAffx.C23000015--8e-2At2g38490CIPK22 (CBL-INTERACTING PROTEIN KINASE 22)O.I.C.G.S.X.
0.015e+032PsAffx.C142000021_atPsAffx.C142000021--1e-1At1g69410ELF5A-3 (EUKARYOTIC ELONGATION FACTOR 5A-3)O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.042e-136At5g62520Arabidopsis thaliana836372SRO5 (SIMILAR TO RCD ONE 5)Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. Up-regulated by NaCl. SRO5 and P5CDH (an overlapping gene in the antisense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response.---O.I.C.G.S.X.
0.042e+032HU08A18u_atHordeum vulgareHU08A18u--4e+0At5g46560unknown proteinO.I.C.G.S.X.
0.046e+032Os05g0179201Oryza sativa9633.m00765--3e+0At5g05690CPD (CONSTITUTIVE PHOTOMORPHOGENIC DWARF)O.I.C.G.S.X.
0.102e-550PtpAffx.210421.1.S1_atPopulus trichocarpapmrna20471hypothetical protein-4e-33At1g73805calmodulin bindingO.I.C.G.S.X.
0.041e+130TaAffx.86715.1.S1_atTriticum aestivumCA602140--1e+0At1g31220phosphoribosylglycinamide formyltransferaseO.I.C.G.S.X.
0.034e+0301620801_atVitis viniferaCF212147hypothetical protein LOC100245496-1e+0At4g09153LCR36 (Low-molecular-weight cysteine-rich 36)O.I.C.G.S.X.
0.035e+030Zm.860.1.A1_atZea maysAI600859--1e+0At1g32980subtilisin-like serine protease-relatedO.I.C.G.S.X.



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