Homology analysis

Gene ID GmaAffx.24635.1.A1_at
Gene name
Functional description Similar to At5g23880: CPSF100 (CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 100) (Ev=9e-23)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.073e-1789GmaAffx.24635.2.S1_atBU964597--3e-1At4g02450glycine-rich proteinO.I.C.G.S.X.
0.064e-756GmaAffx.87794.1.S1_atBQ740663--4e-9At1g22610C2 domain-containing proteinO.I.C.G.S.X.
0.064e-756GmaAffx.875.7.A1_s_atCD404667--3e-3At4g32260ATP synthase familyO.I.C.G.S.X.
0.054e-756GmaAffx.65008.1.S1_atBQ610652--9e-1At3g55330PPL1 (PsbP-like protein 1)O.I.C.G.S.X.
0.064e-756GmaAffx.51426.1.S1_atBQ610762--8e-1At3g50925-O.I.C.G.S.X.
0.054e-756GmaAffx.2696.2.S1_atAW759738--3e-1At3g61590HWS (HAWAIIAN SKIRT)O.I.C.G.S.X.
0.074e-756GmaAffx.13587.1.S1_atBG654181--2e+0At3g54270sucrose-phosphatase 3 (SPP3)O.I.C.G.S.X.
0.034e-756Gma.4711.2.S1_atBU082275--3e-18At5g59610DNAJ heat shock N-terminal domain-containing proteinO.I.C.G.S.X.
0.034e-756Gma.4711.2.S1_a_atBU082275--3e-18At5g59610DNAJ heat shock N-terminal domain-containing proteinO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.079e-23107At5g23880Arabidopsis thaliana832453CPSF100 (CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 100)Encodes a protein similar to the 100kD subunit of cleavage and polyadenylation specificity factor (CPSF), the factor responsible for the recognition of the AAUAAA motif during mRNA polyadenylation. The protein interacts with a portion of a nuclear poly(A) polymerase. It is likely to be a part of the mRNA 3'end formation apparatus.---O.I.C.G.S.X.
0.072e-652rbaal20n01_s_atHordeum vulgarerbaal20n01--4e-1At3g46160protein kinase-relatedO.I.C.G.S.X.
0.041e-552Os09g0569400Oryza sativaAK063384.1-RNA-metabolising metallo-beta-lactamase domaincontaining protein7e-21At5g23880CPSF100 (CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 100)O.I.C.G.S.X.
0.041e-757Ptp.5850.2.A1_atPopulus trichocarpaCV253282--1e-22At4g1810060S ribosomal protein L32 (RPL32A)O.I.C.G.S.X.
0.088e-857TaAffx.54234.1.S1_atTriticum aestivumCA684139--2e+0At5g58530glutaredoxin family proteinO.I.C.G.S.X.
0.046e-6501617182_atVitis viniferaCB921793--5e-3At1g62240unknown proteinO.I.C.G.S.X.
0.052e-652Zm.3801.2.A1_atZea maysAY112091.1--1e+0At4g01590unknown proteinO.I.C.G.S.X.



Back to the CoP portal site

Back to the KAGIANA project homepage