Homology analysis

Gene ID Gma.5748.1.S1_at
Gene name
Functional description Similar to At5g64813: LIP1 (Light Insensitive Period1) (Ev=1e-63)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.144e-64246GmaAffx.80857.1.S1_atBE474512--1e-40At5g64813LIP1 (Light Insensitive Period1)O.I.C.G.S.X.
0.014e-240Gma.9720.1.S1_atCD413624--5e-173At3g60750transketolase, putativeO.I.C.G.S.X.
0.027e-136Gma.12015.1.A1_s_atAW310083--4e+0At2g19300unknown proteinO.I.C.G.S.X.
0.013e+034PsAffx.C46000015_atPsAffx.C46000015--2e+0At3g44783unknown proteinO.I.C.G.S.X.
0.023e+034GmaAffx.59856.1.S1_atBU548694--2e-24At5g17530phosphoglucosamine mutase family proteinO.I.C.G.S.X.
0.023e+034GmaAffx.36245.1.S1_atBU549734--1e+0At3g50800unknown proteinO.I.C.G.S.X.
0.023e+034Gma.1780.1.S1_atBM892829--5e-12At2g28910CXIP4 (CAX INTERACTING PROTEIN 4)O.I.C.G.S.X.
0.023e+034Gma.13530.1.S1_atBU543994--1e-4At1g49510emb1273 (embryo defective 1273)O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.401e-63244At5g64813Arabidopsis thaliana836603LIP1 (Light Insensitive Period1)The LIP1 gene encodes a small GTPase that influences the light input pathway of the plant circadian network. An MBP:LIP1 fusion protein has GTP hydrolyzing abilities in vitro. In plants, LIP1 seems to play a negative role in regulating circadian period that can be suppressed by light. LIP1 also seems to negatively affect light-pulse-dependent resetting of the clock, especially during the first portion of the subjective evening. LIP1 expression levels are not significantly affected by the circadian clock in seedlings grown under LL conditions. The levels of the YFP:LIP1 protein expressed under the control of the 35S promoter, shows a low amplitude variation, with protein levels peaking near the beginning of subjective night under LL conditions. In hypocotyl epidermal cells of dark and light-grown seedlings, a YFP:LIP1 fusion protein can be seen in the cytoplasm and the nucleus, and does not cluster in nuclear speckles. LIP1 may also be involved in photomorphogenesis.---O.I.C.G.S.X.
0.137e-1477Contig16972_atHordeum vulgareContig16972--5e-10At5g64813LIP1 (Light Insensitive Period1)O.I.C.G.S.X.
0.191e-21105Os.46527.1.S1_atOryza sativa---0O.I.C.G.S.X.
0.333e-52206PtpAffx.102954.1.A1_atPopulus trichocarpaCK095860hypothetical protein-1e-35At5g64813LIP1 (Light Insensitive Period1)O.I.C.G.S.X.
0.162e-1273Ta.3952.2.S1_atTriticum aestivumBM137915--7e-12At5g09910ATP binding / GTP binding / transcription factor bindingO.I.C.G.S.X.
0.233e-9611616570_atVitis viniferaCF568974--1e+0At5g08220unknown proteinO.I.C.G.S.X.
0.028e-134Zm.15926.1.S1_atZea maysCF075383--2e+1Atmg01010-O.I.C.G.S.X.

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