Homology analysis

Gene ID Gma.11238.1.S1_a_at
Gene name
Functional description Similar to At5g60600: HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE) (Ev=3e-121)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.9804040Gma.11238.1.S1_atBQ454110--3e-121At5g60600HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE)O.I.C.G.S.X.
0.3701005GmaAffx.90026.1.S1_s_atCF805751--5e-18At5g60600HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE)O.I.C.G.S.X.
0.014e-138HgAffx.23406.1.S1_atBF014443--4e-10At5g20570RBX1 (RING-BOX 1)O.I.C.G.S.X.
0.014e-138GmaAffx.26030.1.A1_atBU545898--1e+0At5g50740metal ion bindingO.I.C.G.S.X.
0.034e-138Gma.13479.1.A1_atCD399580--9e-2At5g63410leucine-rich repeat transmembrane protein kinase, putativeO.I.C.G.S.X.
0.012e+036GmaAffx.72258.1.S1_atBF067925--1e-15At4g21750ATML1 (MERISTEM LAYER 1)O.I.C.G.S.X.
0.012e+036Gma.389.1.A1_atAW349686--3e+0At5g14920gibberellin-regulated family proteinO.I.C.G.S.X.
0.012e+036Gma.3938.1.S1_atBF595377--4e-11At5g09680cytochrome b5 domain-containing proteinO.I.C.G.S.X.
0.006e+034PsAffx.C7000008_atPsAffx.C7000008--8e-1At2g42870PAR1 (PHY RAPIDLY REGULATED 1)O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.463e-121436At5g60600Arabidopsis thaliana836181HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE)Encodes a chloroplast-localized hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) synthase (HDS), catalyzes the formation of HMBPP from 2-C-methyl-D-erythrytol 2,4-cyclodiphosphate (MEcPP). The HDS enzyme controls the penultimate steps of the biosynthesis of IPP and dimethylallyl diphosphate (DMAPP) via the MEP pathway and may serve as a metabolic control point for SA-mediated disease resistance. In the light, the electrons required for the reaction catalyzed by HDS are directly provided by the electron flow from photosynthesis via ferredoxin. In the dark however, the enzyme requires an electron shuttle: ferredoxin-NADP+ reductase.---O.I.C.G.S.X.
0.332e-71270Contig3822_atHordeum vulgareContig3822--6e-43At5g60600HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE)O.I.C.G.S.X.
0.409e-111402Os02g0603800Oryza sativaAK120769.1-Isoprenoid biosynthesis-like protein (Fragment)6e-86At5g60600HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE)O.I.C.G.S.X.
0.451e-152541Ptp.2213.1.S1_atPopulus trichocarpaCV262432hypothetical protein-5e-45At5g60600HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE)O.I.C.G.S.X.
0.166e-1893Ta.10120.1.S1_atTriticum aestivumBJ224992--6e-14At5g60600HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE)O.I.C.G.S.X.
0.288e-1073871613715_atVitis viniferaCF211315hypothetical protein LOC100257071-9e-21At5g60600HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE)O.I.C.G.S.X.
0.411e-109397Zm.10841.1.A1_atZea maysBQ619556hydroxymethylbutenyl 4-diphosphate synthase-2e-64At5g60600HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE)O.I.C.G.S.X.



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