Homology analysis

Gene ID Contig5809_at
Gene name
Functional description Similar to At1g58440: XF1 (Ev=2e-14)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.390698rbags16h12_s_atrbags16h12--9e-1At2g04066MATE efflux protein-relatedO.I.C.G.S.X.
0.390698rbags16h12_atrbags16h12--9e-1At2g04066MATE efflux protein-relatedO.I.C.G.S.X.
0.014e-136Contig2185_atContig2185--4e-99At1g06430FTSH8O.I.C.G.S.X.
0.012e+034Contig5442_atContig5442--4e-107At3g19980ATFYPP3 (FLOWER-SPECIFIC, PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE 3)O.I.C.G.S.X.
0.022e+034Contig15074_atContig15074--4e+0At2g27160unknown proteinO.I.C.G.S.X.
0.012e+034Contig13871_atContig13871--2e+0At4g35840zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.S.X.
0.012e+034Contig2949_s_atContig2949--1e-21At3g55800SBPASE (sedoheptulose-bisphosphatase)O.I.C.G.S.X.
0.012e+034Contig2454_atContig2454phospholipid hydroperoxide glutathione peroxidase-like protein-5e-72At4g11600ATGPX6 (GLUTATHIONE PEROXIDASE 6)O.I.C.G.S.X.
0.012e+034HW01F10u_s_atHW01F10u--1e-24At1g50370serine/threonine protein phosphatase, putativeO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.212e-1481At1g58440Arabidopsis thaliana842213XF1Encodes a putative protein that has been speculated, based on sequence similarities, to have squalene monooxygenase activity.---O.I.C.G.S.X.
0.201e-22109GmaAffx.20777.1.S1_atGlycine maxBE819900--4e-8At2g22830SQE2 (squalene epoxidase 2)O.I.C.G.S.X.
0.6101400Os03g0231800Oryza sativaAK065032.1-XF1 protein (Squalene monooxygenase, putative)1e-18At4g37760SQE3 (squalene epoxidase 3)O.I.C.G.S.X.
0.391e-46188PtpAffx.205391.1.S1_atPopulus trichocarpapmrna10677hypothetical protein-3e-68At1g58440XF1O.I.C.G.S.X.
0.8102422Ta.7591.1.S1_atTriticum aestivumCD872021--2e-8At4g37760SQE3 (squalene epoxidase 3)O.I.C.G.S.X.
0.107e-5481616202_atVitis viniferaBQ792867hypothetical protein LOC100262930-1e-3At1g58440XF1O.I.C.G.S.X.
0.580827Zm.7407.1.A1_a_atZea maysBM074289squalene monooxygenase-3e-7At4g37760SQE3 (squalene epoxidase 3)O.I.C.G.S.X.



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