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| Gene ID | Contig5301_at |
| Gene name | |
| Functional description | Similar to At4g38130: HD1 (HISTONE DEACETYLASE 1) (Ev=1e-43) |
| HF | Ev | BS | Gene ID | Repr. ID | Gene Name | Functional Description | Ev | AGI code | Arabidopsis gene name | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.01 | 3e-2 | 40 | Contig6525_at | Contig6525 | - | - | 1e-3 | At5g62640 | proline-rich family protein | O.I. | C.G. | S.X. | |
| 0.02 | 3e-2 | 40 | Contig14748_at | Contig14748 | - | - | 5e+0 | At4g02482 | chloroplast outer envelope GTP-binding protein, putative | O.I. | C.G. | S.X. | |
| 0.02 | 1e-1 | 38 | Contig12356_at | Contig12356 | - | - | 2e-6 | At1g20000 | TAF11b (TBP-ASSOCIATED FACTOR 11b) | O.I. | C.G. | S.X. | |
| 0.02 | 1e-1 | 38 | EBro08_SQ012_K01_s_at | EBro08_SQ012_K01 | - | - | 6e-1 | At1g76820 | GTP binding / GTPase | O.I. | C.G. | S.X. | |
| 0.01 | 1e-1 | 38 | Contig22697_at | Contig22697 | - | - | 9e+0 | At5g47770 | FPS1 (FARNESYL DIPHOSPHATE SYNTHASE 1) | O.I. | C.G. | S.X. | |
| 0.01 | 1e-1 | 38 | Contig14085_at | Contig14085 | - | - | 3e+0 | At5g08060 | unknown protein | O.I. | C.G. | S.X. | |
| 0.01 | 4e-1 | 36 | Contig14925_at | Contig14925 | - | - | 1e-1 | At1g27390 | TOM20-2 (TRANSLOCASE OUTER MEMBRANE 20-2) | O.I. | C.G. | S.X. | |
| 0.02 | 4e-1 | 36 | EBro02_SQ008_L16_at | EBro02_SQ008_L16 | - | - | 1e+0 | At1g65484 | unknown protein | O.I. | C.G. | S.X. | |
| 0.01 | 4e-1 | 36 | Contig14149_at | Contig14149 | - | - | 4e-9 | At4g36980 | unknown protein | O.I. | C.G. | S.X. |
| HF | Ev | BS | Gene ID | Organism | Repr. ID | Gene Name | Functional Description | Ev | AGI code | Arabidopsis gene name | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.41 | 1e-43 | 178 | At4g38130 | Arabidopsis thaliana | 829969 | HD1 (HISTONE DEACETYLASE 1) | Encodes a histone deacetylase that enhances AtERF7-mediated transcriptional repression. Binds SIM3 and ERF7. Expressed in the nucleus in most tissues examined and throughout the life of the plant. Involved in jasmonic acid and ethylene dependent pathogen resistance. The sequence in GenBank has 17 AG dinucleotide repeats missing, which is also missing in Ler shotgun sequence from Cereon. Although it is annotated to be in Columbia, the GB sequence is probably not of Columbia origin. Plays a role in embryogenesis as mutants grown at higher temperatures display abnormalities in the organization of the root and shoot. Plant lines expressing an RNAi construct targeted against HDA19 shows some resistance to agrobacterium-mediated root transformation. | - | - | - | O.I. | C.G. | S.X. | |
| 0.34 | 1e-49 | 198 | GmaAffx.58612.1.S1_at | Glycine max | BM954406 | - | - | 6e-19 | At5g63110 | HDA6 (HISTONE DEACETYLASE 6) | O.I. | C.G. | S.X. | |
| 0.68 | 0 | 1051 | Os06g0583400 | Oryza sativa | AF513382.1 | - | Histone deacetylase HDAC1 | 6e-61 | At4g38130 | HD1 (HISTONE DEACETYLASE 1) | O.I. | C.G. | S.X. | |
| 0.26 | 2e-33 | 145 | PtpAffx.6033.1.S1_at | Populus trichocarpa | CA932145 | histone deacetylase | - | 2e-91 | At4g38130 | HD1 (HISTONE DEACETYLASE 1) | O.I. | C.G. | S.X. | |
| 0.91 | 0 | 2779 | Ta.23826.1.S1_at | Triticum aestivum | BT009381.1 | Histone deacetylase HDAC3 | - | 3e-41 | At4g38130 | HD1 (HISTONE DEACETYLASE 1) | O.I. | C.G. | S.X. | |
| 0.13 | 6e-24 | 111 | 1614482_at | Vitis vinifera | CF206009.1 | hypothetical protein LOC100241833 | - | 2e-21 | At4g38130 | HD1 (HISTONE DEACETYLASE 1) | O.I. | C.G. | S.X. | |
| 0.58 | 0 | 1338 | Zm.398.1.S1_at | Zea mays | AF384032.1 | histone deacetylase HDA101 /// RPD3 histone deacetylase homolog | - | 1e-30 | At4g38130 | HD1 (HISTONE DEACETYLASE 1) | O.I. | C.G. | S.X. |
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