Homology analysis

Gene ID Contig5260_s_at
Gene name
Functional description Similar to At2g29630: THIC (ThiaminC) (Ev=0)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
1.0005604Contig5260_atContig5260--0At2g29630THIC (ThiaminC)O.I.C.G.S.X.
0.014e-240Contig24654_atContig24654--1e-1At1g28460AGL59 (AGAMOUS-LIKE 59)O.I.C.G.S.X.
0.017e-136Contig14879_atContig14879--2e+0At4g11870unknown proteinO.I.C.G.S.X.
0.017e-136Contig14769_atContig14769--8e-1At3g21830ASK8 (ARABIDOPSIS SKP1-LIKE 8)O.I.C.G.S.X.
0.017e-136HZ49L13r_atHZ49L13r--8e-1At2g20619-O.I.C.G.S.X.
0.017e-136Contig12856_atContig12856--9e-16At4g16600transferase, transferring glycosyl groups / transferase, transferring hexosyl groupsO.I.C.G.S.X.
0.013e+034Contig10750_atContig10750--1e-4At1g51600TIFY2AO.I.C.G.S.X.
0.013e+034Contig21006_atContig21006--6e-3Atmg00820-O.I.C.G.S.X.
0.013e+034Contig9244_atContig9244--3e-16At4g26750hydroxyproline-rich glycoprotein family proteinO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.430638At2g29630Arabidopsis thaliana817513THIC (ThiaminC)Encodes a protein involved in thiamine biosynthesis. The protein is an iron-sulfur cluster protein predicted to catalyze the conversion of 5-aminoimidazole ribonucleotide (AIR) to hydroxymethylpyrimidine phosphate (HMP-P). A severe reduction of THIC levels in plants decreases vitamin B1 (thiamin diphosphate (TPP)) levels and also leads to changes in the levels of numerous other metabolites since so many primary metabolic enzymes require a TPP co-factor. thiC mutants are chlorotic and arrest in their development at the cotyledon stage. A N-terminal targeting sequence directs the THIC protein to the chloroplast stroma. The THIC transcript is regulated by a TPP riboswitch in the 3' UTR. THIC transcripts are observed in seedlings 5 or more days after germination, and light promotes the expression of this gene.---O.I.C.G.S.X.
0.377e-102373Gma.10771.3.S1_x_atGlycine maxCD394330--8e-152At2g29630THIC (ThiaminC)O.I.C.G.S.X.
0.7102082Os.18490.3.S1_atOryza sativa---0O.I.C.G.S.X.
0.452e-173611Ptp.4820.1.S1_x_atPopulus trichocarpaBP933342hypothetical protein-0At2g29630THIC (ThiaminC)O.I.C.G.S.X.
0.8203132Ta.3927.1.S1_atTriticum aestivumBT009095.1--3e-171At2g29630THIC (ThiaminC)O.I.C.G.S.X.
0.163e-361531612311_atVitis viniferaCA812173hypothetical protein LOC100250096-1e-47At2g29630THIC (ThiaminC)O.I.C.G.S.X.
0.6602024Zm.3219.3.S1_atZea maysCF056029thiamine biosynthesis protein thiC-2e-119At2g29630THIC (ThiaminC)O.I.C.G.S.X.



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