Homology analysis

Gene ID Contig5234_at
Gene name
Functional description Similar to At1g09140: SF2/ASF-like splicing modulator (SRP30) (Ev=5e-11)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.7201114Contig5235_s_atContig5235--4e-7At1g09140SF2/ASF-like splicing modulator (SRP30)O.I.C.G.S.X.
0.263e-75282Contig16119_atContig16119--8e+0Atcg01060-O.I.C.G.S.X.
0.381e-46186Contig4304_atContig4304--3e-12At1g09140SF2/ASF-like splicing modulator (SRP30)O.I.C.G.S.X.
0.173e-35149Contig9536_atContig9536--6e-38At1g09140SF2/ASF-like splicing modulator (SRP30)O.I.C.G.S.X.
0.098e-548HU02A01u_s_atHU02A01u--4e+0At5g60330unknown proteinO.I.C.G.S.X.
0.098e-548HU02A01u_atHU02A01u--4e+0At5g60330unknown proteinO.I.C.G.S.X.
0.028e-238Contig15088_atContig15088--1e-1At4g35783RTFL6 (ROTUNDIFOLIA LIKE 6)O.I.C.G.S.X.
0.028e-238Contig5105_atContig5105--8e-9At3g26060ATPRX QO.I.C.G.S.X.
0.028e-238Contig25030_s_atContig25030--2e-30At3g47460ATSMC2O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.155e-1169At1g09140Arabidopsis thaliana837433SF2/ASF-like splicing modulator (SRP30)Encodes a serine-arginine rich RNA binding protein involved in regulation of splicing (including splicing of itself). Exists as 3 alternative spliced forms that are differentially expressed.---O.I.C.G.S.X.
0.102e-861Gma.2497.1.S1_atGlycine maxCD396374--7e-46At3g49430SRp34a (Ser/Arg-rich protein 34a)O.I.C.G.S.X.
0.493e-109397Os03g0344100Oryza sativaAK061903.1-Splicing factor SR1D1e-13At4g02430pre-mRNA splicing factor, putative / SR1 protein, putativeO.I.C.G.S.X.
0.207e-1789PtpAffx.210886.1.S1_atPopulus trichocarpapmrna21383hypothetical protein-5e-25At1g09140SF2/ASF-like splicing modulator (SRP30)O.I.C.G.S.X.
0.6901009Ta.7066.1.S1_atTriticum aestivumBJ320259--2e-3At3g49430SRp34a (Ser/Arg-rich protein 34a)O.I.C.G.S.X.
0.203e-9611616840_atVitis viniferaCF608637hypothetical protein LOC100255499-9e-15At1g09140SF2/ASF-like splicing modulator (SRP30)O.I.C.G.S.X.
0.514e-96351Zm.10359.1.S1_atZea maysT69043ASF/SF2-like pre-mRNA splicing factor SRP32-2e-19At1g09140SF2/ASF-like splicing modulator (SRP30)O.I.C.G.S.X.



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