Homology analysis

Gene ID Contig5187_at
Gene name
Functional description Similar to At5g08420: RNA binding (Ev=3e-9)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.530749Contig5188_s_atContig5188--5e-12At5g08420RNA bindingO.I.C.G.S.X.
0.372e-169595HS16G02u_x_atHS16G02u--7e-1At1g22180SEC14 cytosolic factor family protein / phosphoglyceride transfer family proteinO.I.C.G.S.X.
0.294e-81301Contig21528_atContig21528--7e-1At5g47920unknown proteinO.I.C.G.S.X.
0.022e-240HVSMEh0085D01r2_atHVSMEh0085D01r2--4e+0At4g21920unknown proteinO.I.C.G.S.X.
0.021e-138Contig661_atContig661--4e-23At2g3939060S ribosomal protein L35 (RPL35B)O.I.C.G.S.X.
0.021e-138Contig23329_atContig23329--2e-1At1g12180-O.I.C.G.S.X.
0.014e-136Contig10100_atContig10100--6e-17At4g21660proline-rich spliceosome-associated (PSP) family proteinO.I.C.G.S.X.
0.014e-136Contig9086_atContig9086--5e-18At3g48780SPT1 (SERINE PALMITOYLTRANSFERASE 1)O.I.C.G.S.X.
0.014e-136Contig8821_atContig8821--4e-9At5g45190cyclin family proteinO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.213e-963At5g08420Arabidopsis thaliana830741RNA bindingF:RNA binding;P:biological_process unknown;C:cellular_component unknown;OMFAPB---O.I.C.G.S.X.
0.132e-24115GmaAffx.60021.1.S1_atGlycine maxBE805276--4e+0At4g40090AGP3 (arabinogalactan-protein 3)O.I.C.G.S.X.
0.510803Os10g0452800Oryza sativaAK070158.1-Ribosomal RNA assembly protein mis38e-26At5g08420RNA bindingO.I.C.G.S.X.
0.092e-861PtpAffx.60356.1.S1_atPopulus trichocarpaAI163531hypothetical protein-7e-33At5g08420RNA bindingO.I.C.G.S.X.
0.8501471Ta.1012.1.S1_atTriticum aestivumCK151836--3e-6At5g08420RNA bindingO.I.C.G.S.X.
0.022e-1361618325_atVitis viniferaCD799971hypothetical protein LOC100245609-9e-1At1g12630DNA binding / transcription activator/ transcription factorO.I.C.G.S.X.
0.480670Zm.12340.1.S1_atZea maysAY104197.1--4e-9At5g08420RNA bindingO.I.C.G.S.X.



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