Homology analysis

Gene ID Contig5032_at
Gene name
Functional description Similar to At4g38210: ATEXPA20 (ARABIDOPSIS THALIANA EXPANSIN A20) (Ev=4e-1)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.630781HU09E20u_s_atHU09E20u--3e+0At3g55820-O.I.C.G.S.X.
0.025e-238Contig10787_atContig10787--5e-5At4g27880seven in absentia (SINA) family proteinO.I.C.G.S.X.
0.025e-238Contig13826_atContig13826--2e-1At4g02730transducin family protein / WD-40 repeat family proteinO.I.C.G.S.X.
0.022e-136Contig4104_atContig4104--1e-19At1g73230nascent polypeptide-associated complex (NAC) domain-containing proteinO.I.C.G.S.X.
0.022e-136Contig14861_atContig14861--5e-1At2g45530zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.S.X.
0.032e-136Contig17676_atContig17676--1e+0At4g19810glycosyl hydrolase family 18 proteinO.I.C.G.S.X.
0.022e-136Contig13930_atContig13930--4e-1At2g32820-O.I.C.G.S.X.
0.022e-136Contig4105_s_atContig4105--8e-33At1g73230nascent polypeptide-associated complex (NAC) domain-containing proteinO.I.C.G.S.X.
0.028e-134HVSMEn0019F17r2_atHVSMEn0019F17r2--3e-1At5g18690AGP25 (ARABINOGALACTAN PROTEINS 25)O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.024e-136At4g38210Arabidopsis thaliana829977ATEXPA20 (ARABIDOPSIS THALIANA EXPANSIN A20)expansin -like protein. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.---O.I.C.G.S.X.
0.042e-654Gma.13924.1.S1_atGlycine maxAW100408--8e-1At5g19900PRLI-interacting factor, putativeO.I.C.G.S.X.
0.322e-47190Os.8974.1.S1_atOryza sativa---0O.I.C.G.S.X.
0.062e+034Ptp.4380.1.S1_s_atPopulus trichocarpaCV247627hypothetical protein-1e-13At3g13882structural constituent of ribosomeO.I.C.G.S.X.
0.790757Ta.3223.1.S1_atTriticum aestivumCA663326--6e+0At5g63500unknown proteinO.I.C.G.S.X.
0.035e-1341618693_atVitis viniferaCB348122hypothetical protein LOC100263832-9e-32At5g56500ATP binding / protein bindingO.I.C.G.S.X.
0.291e-42173Zm.6121.1.S1_atZea maysCD439726--4e-1At5g54540-O.I.C.G.S.X.



Back to the CoP portal site

Back to the KAGIANA project homepage