Homology analysis

Gene ID Contig4608_at
Gene name
Functional description Similar to At1g12840: DET3 (DE-ETIOLATED 3) (Ev=3e-9)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.016e-342Contig6305_atContig6305--1e+0At5g14930SAG101 (SENESCENCE-ASSOCIATED GENE 101)O.I.C.G.S.X.
0.012e-240Contig11761_atContig11761--2e-1At3g61490glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinO.I.C.G.S.X.
0.014e-136Contig11674_atContig11674--3e-1At5g49420MADS-box protein (AGL84)O.I.C.G.S.X.
0.024e-136HVSMEl0010P10f_x_atHVSMEl0010P10f--2e+0At1g35230AGP5 (ARABINOGALACTAN-PROTEIN 5)O.I.C.G.S.X.
0.011e+034Contig2888_atContig2888NADP-dependent malic enzyme-2e-17At5g11670ATNADP-ME2 (NADP-malic enzyme 2)O.I.C.G.S.X.
0.021e+034Contig19453_atContig19453--5e+0Atcg00140-O.I.C.G.S.X.
0.011e+034Contig2830_atContig2830--2e-4At5g22920zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.S.X.
0.011e+034Contig9152_atContig9152--4e-1At3g59370unknown proteinO.I.C.G.S.X.
0.011e+034Contig7678_atContig7678--9e-3At5g36001-O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.203e-963At1g12840Arabidopsis thaliana837840DET3 (DE-ETIOLATED 3)Encodes subunit C of the vacuolar H(+)-ATPase (V-ATPase). Bound and phosphorylated by AtWNK8.---O.I.C.G.S.X.
0.157e-550Gma.1440.2.S1_s_atGlycine maxBG839819--6e-32At1g12840DET3 (DE-ETIOLATED 3)O.I.C.G.S.X.
0.510805Os05g0593100Oryza sativaAK061855.1-Vacuolar ATP synthase subunit C (EC 3.6.3.14)(V-ATPase C subunit) (Vacuolar proton pump C subunit)2e-10At1g12840DET3 (DE-ETIOLATED 3)O.I.C.G.S.X.
0.075e-1273PtpAffx.1148.1.S1_a_atPopulus trichocarpaCV261357hypothetical protein-1e-64At1g12840DET3 (DE-ETIOLATED 3)O.I.C.G.S.X.
0.6101251Ta.6496.1.S1_atTriticum aestivumCD878462vacuolar proton-ATPase C subunit-2e-10At1g12840DET3 (DE-ETIOLATED 3)O.I.C.G.S.X.
0.029e-1341611100_s_atVitis viniferaBQ794859hypothetical protein LOC100255131-6e-15At5g12470unknown proteinO.I.C.G.S.X.
0.600805Zm.4630.2.A1_atZea maysCK347497hypothetical protein LOC100273246-8e-7At1g12840DET3 (DE-ETIOLATED 3)O.I.C.G.S.X.



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