Homology analysis

Gene ID Contig416_x_at
Gene name
Functional description Similar to At4g24190: SHD (SHEPHERD) (Ev=5e-29)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.4901142Contig91_atContig91--2e-67At4g24190SHD (SHEPHERD)O.I.C.G.S.X.
0.668e-171599Contig71_s_atContig71GRP94 homologue-1e-9At4g24190SHD (SHEPHERD)O.I.C.G.S.X.
0.386e-101367Contig568_s_atContig568GRP94 homologue-4e-2At1g06240unknown proteinO.I.C.G.S.X.
0.073e-1685EBro08_SQ012_P22_atEBro08_SQ012_P22--1e-2At1g07340ATSTP2 (SUGAR TRANSPORTER 2)O.I.C.G.S.X.
0.027e-548Contig1204_s_atContig1204cytosolic heat shock protein 90-0At5g56010HSP81-3O.I.C.G.S.X.
0.041e-344Contig25388_atContig25388--5e-6At2g19790clathrin adaptor complex small chain family proteinO.I.C.G.S.X.
0.041e-344Contig25388_s_atContig25388--5e-6At2g19790clathrin adaptor complex small chain family proteinO.I.C.G.S.X.
0.032e-240Contig1206_s_atContig1206--0At5g56000heat shock protein 81-4 (HSP81-4)O.I.C.G.S.X.
0.042e-240Contig1207_atContig1207--2e-55At5g56000heat shock protein 81-4 (HSP81-4)O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.135e-29129At4g24190Arabidopsis thaliana828520SHD (SHEPHERD)encodes an ortholog of GRP94, an ER-resident HSP90-like protein and is involved in regulation of meristem size and organization. Single and double mutant analyses suggest that SHD may be required for the correct folding and/or complex formation of CLV proteins. Lines carrying recessive mutations in this locus exhibits expanded shoot meristems, disorganized root meristems, and defective pollen tube elongation. Transcript is detected in all tissues examined and is not induced by heat. Endoplasmin supports the protein secretory pathway and has a role in proliferating tissues.---O.I.C.G.S.X.
0.265e-1479GmaAffx.91200.1.S1_s_atGlycine maxCF806925--1e-40At4g24190SHD (SHEPHERD)O.I.C.G.S.X.
0.400737Os08g0104600Oryza sativaD30763.1-Ferredoxin I, chloroplast precursor (Anti-diseaseprotein 1)6e-33At4g24190SHD (SHEPHERD)O.I.C.G.S.X.
0.162e-757PtpAffx.3203.4.A1_atPopulus trichocarpaCV241731hypothetical protein-7e-59At4g24190SHD (SHEPHERD)O.I.C.G.S.X.
0.456e-87321Ta.28235.1.A1_s_atTriticum aestivumBJ214932--5e+0At5g50760auxin-responsive family proteinO.I.C.G.S.X.
0.115e-291271608448_atVitis viniferaBQ792197hypothetical protein LOC100267648-1e-45At4g24190SHD (SHEPHERD)O.I.C.G.S.X.
0.550732Zm.5048.6.A1_a_atZea maysBM380925hypothetical protein LOC100279926 /// endoplasmin-3e-36At4g24190SHD (SHEPHERD)O.I.C.G.S.X.



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