Homology analysis

Gene ID Contig3873_at
Gene name
Functional description Similar to At1g01060: LHY (LATE ELONGATED HYPOCOTYL) (Ev=3e-20)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.370797Contig3875_s_atContig3875--9e-5At1g01060LHY (LATE ELONGATED HYPOCOTYL)O.I.C.G.S.X.
0.230739HV_CEa0006F14r2_x_atHV_CEa0006F14r2--3e+0At5g17480APC1 (ARABIDOPSIS POLLEN CALCIUM-BINDING PROTEIN 1)O.I.C.G.S.X.
0.103e-80299rbaal38l09_s_atrbaal38l09--1e+0At5g50423-O.I.C.G.S.X.
0.015e-240Contig13817_s_atContig13817--4e-14At1g54160NF-YA5 (NUCLEAR FACTOR Y, SUBUNIT A5)O.I.C.G.S.X.
0.015e-240Contig17087_atContig17087--2e+0Atmg00690-O.I.C.G.S.X.
0.015e-240Contig13817_atContig13817--4e-14At1g54160NF-YA5 (NUCLEAR FACTOR Y, SUBUNIT A5)O.I.C.G.S.X.
0.012e-138Contig7046_atContig7046--2e+0At2g21600ATRER1BO.I.C.G.S.X.
0.012e-138Contig6306_atContig6306--5e-18At4g22340phosphatidate cytidylyltransferase, putative / CDP-diglyceride synthetase, putativeO.I.C.G.S.X.
0.012e-138Contig1816_atContig1816--1e+0At1g06700serine/threonine protein kinase, putativeO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.073e-20101At1g01060Arabidopsis thaliana839341LHY (LATE ELONGATED HYPOCOTYL)LHY encodes a myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1---O.I.C.G.S.X.
0.062e-1689GmaAffx.3765.2.A1_atGlycine maxBF066505MYB transcription factor MYB114-1e-10At2g46830CCA1 (CIRCADIAN CLOCK ASSOCIATED 1)O.I.C.G.S.X.
0.592e-146521Os08g0157600Oryza sativaAY452478.1-Myb, DNA-binding domain containing protein5e-31At1g01060LHY (LATE ELONGATED HYPOCOTYL)O.I.C.G.S.X.
0.063e-1585PtpAffx.7997.1.S1_atPopulus trichocarpaBU868664hypothetical protein-2e-10At2g46830CCA1 (CIRCADIAN CLOCK ASSOCIATED 1)O.I.C.G.S.X.
0.5101602Ta.7524.2.A1_a_atTriticum aestivumBF200486--3e-3At2g40410Ca(2+)-dependent nuclease, putativeO.I.C.G.S.X.
0.052e-9631607032_s_atVitis viniferaCB345316hypothetical protein LOC100250535-2e-18At1g01060LHY (LATE ELONGATED HYPOCOTYL)O.I.C.G.S.X.
0.117e-75282Zm.7073.2.A1_atZea maysAI600777--1e-2At5g37260RVE2 (REVEILLE 2)O.I.C.G.S.X.



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