Homology analysis

Gene ID Contig383_at
Gene name
Functional description Similar to At1g79040: PSBR (photosystem II subunit R) (Ev=2e-2)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.4001082Contig996_s_atContig996--5e-3At1g79040PSBR (photosystem II subunit R)O.I.C.G.S.X.
0.380773Contig931_atContig931--5e-3At1g79040PSBR (photosystem II subunit R)O.I.C.G.S.X.
0.223e-110398S0001000056D22F1_atS0001000056D22F1--3e+0At4g34170kelch repeat-containing F-box family proteinO.I.C.G.S.X.
0.141e-51204Contig11477_atContig11477--8e-5At1g79040PSBR (photosystem II subunit R)O.I.C.G.S.X.
0.107e-1685rbaal9h21_s_atrbaal9h21--5e-5At1g79040PSBR (photosystem II subunit R)O.I.C.G.S.X.
0.052e-654Contig23072_atContig23072--2e+0At2g18910hydroxyproline-rich glycoprotein family proteinO.I.C.G.S.X.
0.021e-448HVSMEg0010D04f2_atHVSMEg0010D04f2--1e+0At5g41640unknown proteinO.I.C.G.S.X.
0.026e-446HVSMEi0013A12f_atHVSMEi0013A12f--2e-2At2g35635UBQ7O.I.C.G.S.X.
0.026e-446HVSMEh0088I08r2_s_atHVSMEh0088I08r2--4e+0At5g10320unknown proteinO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.042e-242At1g79040Arabidopsis thaliana844245PSBR (photosystem II subunit R)Encodes for the 10 kDa PsbR subunit of photosystem II (PSII). This subunit appears to be involved in the stable assembly of PSII, particularly that of the oxygen-evolving complex subunit PsbP. Mutants defective in this gene have reduced amounts of subunits PsbP and PsbQ in PSII. In turn, assembly of PsbR is dependent on the presence of PsbJ.---O.I.C.G.S.X.
0.023e-552GmaAffx.29649.1.S1_atGlycine maxCD412120--6e-9At3g10840hydrolase, alpha/beta fold family proteinO.I.C.G.S.X.
0.141e-66256Os.28301.1.S2_atOryza sativa---0O.I.C.G.S.X.
0.077e-963PtpAffx.249.691.S1_atPopulus trichocarpaCV262892hypothetical protein-4e-12At1g79040PSBR (photosystem II subunit R)O.I.C.G.S.X.
0.302e-141504Ta.28750.1.S1_atTriticum aestivumCD884700--2e-3At1g79040PSBR (photosystem II subunit R)O.I.C.G.S.X.
0.024e-4461617182_atVitis viniferaCB921793--5e-3At1g62240unknown proteinO.I.C.G.S.X.
0.022e-344Zm.14917.1.A1_atZea maysBM378490--9e-1At1g04330unknown proteinO.I.C.G.S.X.



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