Homology analysis

Gene ID Contig24884_at
Gene name
Functional description Similar to At5g10140: FLC (FLOWERING LOCUS C) (Ev=1e-1)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.087e-857Contig12483_atContig12483--2e-3At3g57390AGL18O.I.C.G.S.X.
0.084e-652Contig16350_atContig16350--9e-3At3g57390AGL18O.I.C.G.S.X.
0.052e-550Contig10383_atContig10383--6e-4At2g22540SVP (SHORT VEGETATIVE PHASE)O.I.C.G.S.X.
0.077e-548Contig2200_s_atContig2200--2e-3At2g45650AGL6 (AGAMOUS-LIKE 6)O.I.C.G.S.X.
0.043e-446Contig14348_atContig14348--3e-3At1g71692AGL12 (AGAMOUS-LIKE 12)O.I.C.G.S.X.
0.033e-446Contig3831_atContig3831--3e-15At4g18960AG (AGAMOUS)O.I.C.G.S.X.
0.061e-344Contig2198_atContig2198--3e-6At1g24260SEP3 (SEPALLATA3)O.I.C.G.S.X.
0.077e-238Contig7416_atContig7416--2e-4At5g60910AGL8 (agamous-like 8)O.I.C.G.S.X.
0.017e-238Contig4208_atContig4208--6e-6At2g36580pyruvate kinase, putativeO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.031e-138At5g10140Arabidopsis thaliana830878FLC (FLOWERING LOCUS C)MADS-box protein encoded by FLOWERING LOCUS C - transcription factor that functions as a repressor of floral transition and contributes to temperature compensation of the circadian clock. Expression is downregulated during cold treatment. Vernalization, FRI and the autonomous pathway all influence the state of FLC chromatin. Both maternal and paternal alleles are reset by vernalization, but their earliest activation differs in timing and location. Histone H3 trimethylation at lysine 4 and histone acetylation are associated with active FLC expression, whereas histone deacetylation and histone H3 dimethylation at lysines 9 and 27 are involved in FLC repression. Expression is also repressed by two small RNAs (30- and 24-nt) complementary to the FLC sense strand 3 to the polyA site. The small RNAs are most likely derived from an antisense transcript of FLC. Interacts with SOC1 and FT chromatin in vivo. Member of a protein complex.---O.I.C.G.S.X.
0.032e-138PsAffx.C78000026_atGlycine maxPsAffx.C78000026--1e+0At2g18680unknown proteinO.I.C.G.S.X.
0.473e-115416Os04g0614100Oryza sativaAY177698.1-Transcription factor, MADS-box domain containingprotein4e+0At5g23260TT16 (TRANSPARENT TESTA16)O.I.C.G.S.X.
0.051e-242PtpAffx.201225.1.S1_s_atPopulus trichocarpapmrna2438hypothetical protein-6e-24At2g14210AGL44 (AGAMOUS-LIKE 44)O.I.C.G.S.X.
0.197e-1375Ta.27569.1.S1_atTriticum aestivumCD888059MADS-box transcription factor TaAGL35-8e-2At5g51870AGL71 (AGAMOUS-LIKE 71)O.I.C.G.S.X.
0.053e-3421609046_atVitis viniferaCB971729hypothetical protein LOC100256085-1e-13At2g45650AGL6 (AGAMOUS-LIKE 6)O.I.C.G.S.X.
0.153e-1995Zm.9560.1.A1_atZea maysBM382073m17 protein-3e-2At1g77080-O.I.C.G.S.X.



Back to the CoP portal site

Back to the KAGIANA project homepage