Homology analysis

Gene ID Contig24039_at
Gene name
Functional description Similar to At3g60600: VAP (VESICLE ASSOCIATED PROTEIN) (Ev=1e+0)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.411e-97355Contig16591_atContig16591--1e+1At4g05440EDA35 (embryo sac development arrest 35)O.I.C.G.S.X.
0.419e-74276Contig17862_atContig17862--1e+0At5g10550GTE2 (Global transcription factor group E 2)O.I.C.G.S.X.
0.331e-72272Contig20943_atContig20943--2e+0At1g77746unknown proteinO.I.C.G.S.X.
0.432e-71268EBro08_SQ007_M23_atEBro08_SQ007_M23--5e+0At3g01940unknown proteinO.I.C.G.S.X.
0.458e-68256Contig20255_atContig20255--2e-1At5g03350legume lectin family proteinO.I.C.G.S.X.
0.383e-61234Contig24055_atContig24055--5e+0At5g40451unknown proteinO.I.C.G.S.X.
0.277e-59226Contig26250_atContig26250--6e+0At4g38210ATEXPA20 (ARABIDOPSIS THALIANA EXPANSIN A20)O.I.C.G.S.X.
0.303e-52204Contig13024_atContig13024--6e+0At4g21560VPS28-1 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 28 HOMOLOG 1)O.I.C.G.S.X.
0.251e-45182Contig24268_atContig24268--2e+0At5g57345unknown proteinO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.031e+034At3g60600Arabidopsis thaliana825231VAP (VESICLE ASSOCIATED PROTEIN)Encodes VAP27 (for Vesicle-Associated Protein). VAP27 has high homology to the VAP33 family of SNARE-like proteins from animals. May be involved in vesicular transport to or from the ER. Located exclusively in limiting membrane of protein storage vacuoles. Binds SRC2.---O.I.C.G.S.X.
0.047e+032GmaAffx.91289.1.S1_atGlycine maxCF807014--3e+0At3g42830ring-box protein Roc1/Rbx1/Hrt1, putativeO.I.C.G.S.X.
0.039e+032OsAffx.9852.1.S1_atOryza sativa---0O.I.C.G.S.X.
0.042e+034PtpAffx.209904.1.S1_atPopulus trichocarpapmrna19518hypothetical protein-2e+0At3g05936unknown proteinO.I.C.G.S.X.
0.122e-859TaAffx.7664.1.S1_atTriticum aestivumCA654269--4e+0At3g61440CYSC1 (CYSTEINE SYNTHASE C1)O.I.C.G.S.X.
0.034e-1341612492_atVitis viniferaCB343505--2e-1At4g09010APX4 (ASCORBATE PEROXIDASE 4)O.I.C.G.S.X.
0.022e+032Zm.4498.1.A1_atZea maysCD446378hypothetical protein LOC100191506-6e+0At4g20470unknown proteinO.I.C.G.S.X.



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