Homology analysis

Gene ID Contig19167_s_at
Gene name
Functional description Similar to At5g55550: RNA recognition motif (RRM)-containing protein (Ev=1e+1)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.960848Contig19167_atContig19167--1e+1At5g55550RNA recognition motif (RRM)-containing proteinO.I.C.G.S.X.
0.024e-134Contig12417_atContig12417--2e+0At2g03630unknown proteinO.I.C.G.S.X.
0.034e-134Contig15137_atContig15137--4e-1At3g27200plastocyanin-like domain-containing proteinO.I.C.G.S.X.
0.022e+032Contig5538_atContig5538--1e-24At1g30470SIT4 phosphatase-associated family proteinO.I.C.G.S.X.
0.012e+032Contig2589_atContig2589--1e-3At5g13500unknown proteinO.I.C.G.S.X.
0.032e+032Contig36_s_atContig36--2e-17At4g2709060S ribosomal protein L14 (RPL14B)O.I.C.G.S.X.
0.042e+032EBro08_SQ012_I19_atEBro08_SQ012_I19--3e+0At2g46280TRIP-1 (TGF-BETA RECEPTOR INTERACTING PROTEIN 1)O.I.C.G.S.X.
0.032e+032Contig7750_atContig7750--2e+0At3g12510unknown proteinO.I.C.G.S.X.
0.022e+032Contig7031_atContig7031--7e-1At1g58100TCP family transcription factor, putativeO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.021e+130At5g55550Arabidopsis thaliana835649RNA recognition motif (RRM)-containing proteinF:RNA binding, nucleotide binding, nucleic acid binding;P:unknown;C:unknown;MPOFBAV---O.I.C.G.S.X.
0.028e-238PsAffx.C14000066_atGlycine maxPsAffx.C14000066--9e-1At4g14410basic helix-loop-helix (bHLH) family proteinO.I.C.G.S.X.
0.144e-26119Os01g0754000Oryza sativaAK063730.1-Conserved hypothetical protein5e-3At2g20585NFD6 (NUCLEAR FUSION DEFECTIVE 6)O.I.C.G.S.X.
0.055e+032Ptp.1910.1.A1_atPopulus trichocarpaCK092152--2e+0At5g44430PDF1.2c (plant defensin 1.2c)O.I.C.G.S.X.
0.670654Ta.12837.1.A1_atTriticum aestivumCK169294--5e+0At5g11920AtcwINV6 (6-&1-fructan exohydrolase)O.I.C.G.S.X.
0.044e+0301617160_atVitis viniferaCB972995--9e-1At1g25240epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-relatedO.I.C.G.S.X.
0.125e-1993Zm.12667.1.S1_atZea maysCA831456hypothetical protein LOC100276149 /// hypothetical protein LOC100278740-1e+0At1g70895CLE17 (CLAVATA3/ESR-RELATED 17)O.I.C.G.S.X.



Back to the CoP portal site

Back to the KAGIANA project homepage