Back to the CoP portal site
Back to the KAGIANA project homepage
| Gene ID | Contig16972_at |
| Gene name | |
| Functional description | Similar to At5g64813: LIP1 (Light Insensitive Period1) (Ev=5e-10) |
| HF | Ev | BS | Gene ID | Repr. ID | Gene Name | Functional Description | Ev | AGI code | Arabidopsis gene name | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.02 | 6e-2 | 38 | Contig18387_at | Contig18387 | - | - | 1e+0 | At2g46650 | CB5-C (CYTOCHROME B5 ISOFORM C) | O.I. | C.G. | S.X. | |
| 0.01 | 9e-1 | 34 | Contig4225_at | Contig4225 | - | - | 7e-4 | At5g54430 | universal stress protein (USP) family protein | O.I. | C.G. | S.X. | |
| 0.01 | 9e-1 | 34 | Contig7115_at | Contig7115 | - | - | 9e-1 | At5g51100 | FSD2 (FE SUPEROXIDE DISMUTASE 2) | O.I. | C.G. | S.X. | |
| 0.02 | 4e+0 | 32 | Contig21456_at | Contig21456 | - | - | 1e-1 | At5g13700 | ATPAO1 (ARABIDOPSIS THALIANA POLYAMINE OXIDASE 1) | O.I. | C.G. | S.X. | |
| 0.02 | 4e+0 | 32 | Contig16573_at | Contig16573 | - | - | 3e-2 | At3g56610 | unknown protein | O.I. | C.G. | S.X. | |
| 0.01 | 4e+0 | 32 | Contig2820_at | Contig2820 | - | - | 2e-7 | At1g79920 | ATP binding | O.I. | C.G. | S.X. | |
| 0.01 | 4e+0 | 32 | Contig11496_at | Contig11496 | - | - | 5e-11 | At1g23280 | MAK16 protein-related | O.I. | C.G. | S.X. | |
| 0.02 | 4e+0 | 32 | Contig5696_s_at | Contig5696 | - | - | 7e-3 | At5g48335 | unknown protein | O.I. | C.G. | S.X. | |
| 0.02 | 4e+0 | 32 | Contig5696_at | Contig5696 | - | - | 7e-3 | At5g48335 | unknown protein | O.I. | C.G. | S.X. |
| HF | Ev | BS | Gene ID | Organism | Repr. ID | Gene Name | Functional Description | Ev | AGI code | Arabidopsis gene name | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.17 | 5e-10 | 65 | At5g64813 | Arabidopsis thaliana | 836603 | LIP1 (Light Insensitive Period1) | The LIP1 gene encodes a small GTPase that influences the light input pathway of the plant circadian network. An MBP:LIP1 fusion protein has GTP hydrolyzing abilities in vitro. In plants, LIP1 seems to play a negative role in regulating circadian period that can be suppressed by light. LIP1 also seems to negatively affect light-pulse-dependent resetting of the clock, especially during the first portion of the subjective evening. LIP1 expression levels are not significantly affected by the circadian clock in seedlings grown under LL conditions. The levels of the YFP:LIP1 protein expressed under the control of the 35S promoter, shows a low amplitude variation, with protein levels peaking near the beginning of subjective night under LL conditions. In hypocotyl epidermal cells of dark and light-grown seedlings, a YFP:LIP1 fusion protein can be seen in the cytoplasm and the nucleus, and does not cluster in nuclear speckles. LIP1 may also be involved in photomorphogenesis. | - | - | - | O.I. | C.G. | S.X. | |
| 0.13 | 2e-13 | 77 | Gma.5748.1.S1_at | Glycine max | BU761120 | - | - | 1e-63 | At5g64813 | LIP1 (Light Insensitive Period1) | O.I. | C.G. | S.X. | |
| 0.32 | 1e-147 | 523 | Os.46527.1.S1_at | Oryza sativa | - | - | - | 0 | O.I. | C.G. | S.X. | |||
| 0.03 | 3e+0 | 34 | PtpAffx.216110.1.S1_at | Populus trichocarpa | pmrna30693 | hypothetical protein | - | 2e+0 | At5g46970 | invertase/pectin methylesterase inhibitor family protein | O.I. | C.G. | S.X. | |
| 0.85 | 0 | 884 | Ta.3952.1.S1_at | Triticum aestivum | BJ261220 | - | - | 3e-8 | At5g64813 | LIP1 (Light Insensitive Period1) | O.I. | C.G. | S.X. | |
| 0.03 | 2e+0 | 32 | 1613995_at | Vitis vinifera | CB341658 | hypothetical protein LOC100249137 | - | 1e+0 | At4g14695 | unknown protein | O.I. | C.G. | S.X. | |
| 0.03 | 8e-1 | 34 | Zm.14948.1.A1_at | Zea mays | CO523021 | hypothetical protein LOC100277070 | - | 6e+0 | At3g55250 | unknown protein | O.I. | C.G. | S.X. |
Back to the CoP portal site
Back to the KAGIANA project homepage