Homology analysis

Gene ID Contig16955_at
Gene name
Functional description Similar to At5g06160: ATO (ATROPOS) (Ev=1e-1)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.031e-240Contig64_atContig64--2e-2At4g39260GR-RBP8O.I.C.G.S.X.
0.021e-240Z48624_x_atZ48624--5e-4At4g39260GR-RBP8O.I.C.G.S.X.
0.021e-240Contig541_x_atContig541--1e-23At2g2158040S ribosomal protein S25 (RPS25B)O.I.C.G.S.X.
0.031e-240Contig471_s_atContig471--3e-4At4g39260GR-RBP8O.I.C.G.S.X.
0.022e-136Contig7996_atContig7996--8e-10At2g42750DNAJ heat shock N-terminal domain-containing proteinO.I.C.G.S.X.
0.022e-136Contig17726_atContig17726--4e-2At2g3722029 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putativeO.I.C.G.S.X.
0.029e-134Contig10850_atContig10850--1e-11At4g27800protein phosphatase 2C PPH1 / PP2C PPH1 (PPH1)O.I.C.G.S.X.
0.029e-134Contig21001_atContig21001--1e+0At3g19130ATRBP47B (RNA-binding protein 47B)O.I.C.G.S.X.
0.019e-134Contig388_atContig388--1e-74At3g47950AHA4O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.021e-138At5g06160Arabidopsis thaliana830503ATO (ATROPOS)Encodes a protein with similarity to pre-mRNA splicing factor SF3a60 that is involved in gametic cell fate determination. Loss of function results in the ectopic expression of egg cell makers suggesting a role in restriction of gametic cell fate. Expressed strongly in gametophytes and weakly in sporophytes.---O.I.C.G.S.X.
0.037e-136HgAffx.16892.1.S1_atGlycine maxCB824289--8e-1At5g06300carboxy-lyaseO.I.C.G.S.X.
0.055e-21103Os03g0240900Oryza sativaAK120108.1-Tubulin/FtsZ, GTPase domain containing protein4e-2At1g19485AT hook motif-containing proteinO.I.C.G.S.X.
0.033e+034PtpAffx.225126.1.S1_atPopulus trichocarpapmrna44239hypothetical protein-6e-2At4g02250invertase/pectin methylesterase inhibitor family proteinO.I.C.G.S.X.
0.321e-78293TaAffx.62682.1.S1_atTriticum aestivumBQ608487--7e-2At2g43370U1 small nuclear ribonucleoprotein 70 kDa, putativeO.I.C.G.S.X.
0.032e+0321606651_atVitis viniferaCB348536--4e+0At3g15280unknown proteinO.I.C.G.S.X.
0.154e-1581Zm.11663.1.A1_atZea maysCO531620hypothetical protein LOC100273622-2e+0At4g28170unknown proteinO.I.C.G.S.X.



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