Homology analysis

Gene ID Contig15661_at
Gene name
Functional description Similar to At4g17530: ATRAB1C (Ev=5e-17)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.309e-54210Contig2537_atContig2537--1e-29At3g11730ATFP8O.I.C.G.S.X.
0.106e-21101Contig2536_atContig2536--5e-1At2g32360ubiquitin family proteinO.I.C.G.S.X.
0.082e-1583Contig4864_atContig4864--2e-40At4g17530ATRAB1CO.I.C.G.S.X.
0.049e-1477Contig2393_atContig2393--9e-31At1g43890ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18)O.I.C.G.S.X.
0.049e-1477Contig2377_s_atContig2377--1e-29At1g43890ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18)O.I.C.G.S.X.
0.084e-1375Contig4867_s_atContig4867--8e-43At4g17530ATRAB1CO.I.C.G.S.X.
0.048e-857Contig3170_atContig3170--4e-45At1g07410ATRABA2B (ARABIDOPSIS RAB GTPASE HOMOLOG A2B)O.I.C.G.S.X.
0.048e-857Contig3166_atContig3166--3e-49At1g07410ATRABA2B (ARABIDOPSIS RAB GTPASE HOMOLOG A2B)O.I.C.G.S.X.
0.043e-756Contig3169_atContig3169--2e-13At1g16920ATRABA1B (ARABIDOPSIS RAB GTPASE HOMOLOG A1B)O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.225e-1789At4g17530Arabidopsis thaliana827468ATRAB1CF:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:plasma membrane, vacuole, membrane;MOFPBVA---O.I.C.G.S.X.
0.227e-23109Gma.1814.1.S1_atGlycine maxL14929.1--4e-57At3g11730ATFP8O.I.C.G.S.X.
0.378e-107389Os.51115.1.S1_x_atOryza sativa---0O.I.C.G.S.X.
0.195e-24113PtpAffx.30207.1.S1_s_atPopulus trichocarpaCV257448hypothetical protein-2e-61At3g11730ATFP8O.I.C.G.S.X.
0.720961TaAffx.87061.1.S1_atTriticum aestivumBJ306226--2e-21At3g11730ATFP8O.I.C.G.S.X.
0.261e-451821616648_atVitis viniferaCF517228hypothetical protein LOC100254021-1e-78At3g11730ATFP8O.I.C.G.S.X.
0.442e-138492Zm.188.1.S1_s_atZea maysCF017153yptm1 protein-2e-34At3g11730ATFP8O.I.C.G.S.X.



Back to the CoP portal site

Back to the KAGIANA project homepage