Homology analysis

Gene ID Contig13808_at
Gene name
Functional description Similar to At2g04270: RNEE/G (RNASE E/G-LIKE) (Ev=9e-10)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.014e-136Contig6593_s_atContig6593--2e-54At2g07690minichromosome maintenance family protein / MCM family proteinO.I.C.G.S.X.
0.024e-136Contig15590_atContig15590--1e+1At4g02250invertase/pectin methylesterase inhibitor family proteinO.I.C.G.S.X.
0.014e-136Contig6675_atContig6675--3e-2At5g15760plastid-specific 30S ribosomal protein 3, putative / PSRP-3, putativeO.I.C.G.S.X.
0.014e-136Contig6592_atContig6592--2e-35At2g07690minichromosome maintenance family protein / MCM family proteinO.I.C.G.S.X.
0.012e+034Contig13064_atContig13064--3e-2At4g14723-O.I.C.G.S.X.
0.012e+034Contig21437_atContig21437--4e-1At4g15760MO1 (MONOOXYGENASE 1)O.I.C.G.S.X.
0.012e+034Contig3478_atContig3478--1e-115At5g05170CEV1 (CONSTITUTIVE EXPRESSION OF VSP 1)O.I.C.G.S.X.
0.016e+032Contig10043_atContig10043--8e-38At5g13280AK-LYS1 (ASPARTATE KINASE 1)O.I.C.G.S.X.
0.016e+032Contig6461_s_atContig6461--7e-17At1g52360coatomer protein complex, subunit beta 2 (beta prime), putativeO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.139e-1065At2g04270Arabidopsis thaliana814965RNEE/G (RNASE E/G-LIKE)Similar to E.coli endoribonuclease E. Functions as a ribonuclease, is located in the chloroplast, and is involved in chloroplast development. Loss of function mutants are white and arrest at the cotyledon stage. The phenotype is rescued by providing sucrose.---O.I.C.G.S.X.
0.021e+036GmaAffx.90142.1.S1_s_atGlycine maxCF805867--1e-9At3g51550FER (FERONIA)O.I.C.G.S.X.
0.4101217Os08g0323600Oryza sativaAK067514.1-Glycoside hydrolase, starch-binding domaincontaining protein5e-7At2g04270RNEE/G (RNASE E/G-LIKE)O.I.C.G.S.X.
0.092e-1171PtpAffx.211940.1.S1_atPopulus trichocarpapmrna23445hypothetical protein-2e-113At2g04270RNEE/G (RNASE E/G-LIKE)O.I.C.G.S.X.
0.8502387Ta.7502.1.S1_atTriticum aestivumBT008946.1--4e-3At2g04270RNEE/G (RNASE E/G-LIKE)O.I.C.G.S.X.
0.201e-6541614432_atVitis viniferaBM437777hypothetical protein LOC100256290-5e-60At2g04270RNEE/G (RNASE E/G-LIKE)O.I.C.G.S.X.
0.026e-342Zm.6429.1.A1_atZea maysAI834521hypothetical protein LOC100216891-2e-16At2g07690minichromosome maintenance family protein / MCM family proteinO.I.C.G.S.X.



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