Homology analysis

Gene ID Contig13671_at
Gene name
Functional description Similar to At1g25540: PFT1 (PHYTOCHROME AND FLOWERING TIME 1) (Ev=1e-14)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.013e-136Contig9807_atContig9807--1e-22At5g15400U-box domain-containing proteinO.I.C.G.S.X.
0.011e+034Contig2822_s_atContig2822--6e-3At3g18410NADH-ubiquinone oxidoreductase-relatedO.I.C.G.S.X.
0.021e+034HVSMEl0002I19r2_atHVSMEl0002I19r2--5e-3At3g18410NADH-ubiquinone oxidoreductase-relatedO.I.C.G.S.X.
0.011e+034Contig6626_atContig6626--1e-5At3g11200AL2 (ALFIN-LIKE 2)O.I.C.G.S.X.
0.015e+032HVSMEl0010B18r2_atHVSMEl0010B18r2--1e+0At1g49130zinc finger (B-box type) family proteinO.I.C.G.S.X.
0.025e+032HVSMEa0006G22r2_atHVSMEa0006G22r2--6e-1At3g28455CLE25 (CLAVATA3/ESR-RELATED 25)O.I.C.G.S.X.
0.015e+032Contig3471_atContig3471--3e-9At2g37340RSZ33O.I.C.G.S.X.
0.015e+032Contig8533_s_atContig8533--6e-1At5g66940Dof-type zinc finger domain-containing proteinO.I.C.G.S.X.
0.015e+032Contig11355_s_atContig11355--3e-19At5g64050ERS (GLUTAMATE TRNA SYNTHETASE)O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.131e-1481At1g25540Arabidopsis thaliana839141PFT1 (PHYTOCHROME AND FLOWERING TIME 1)Encodes a nuclear protein that acts in a phyB pathway (but downstream of phyB) and induces flowering in response to suboptimal light conditions. Mutants are hypo-responsive to far-red and hyper-responsive to red light and flower late under long day conditions.---O.I.C.G.S.X.
0.163e-448GmaAffx.85901.1.S1_atGlycine maxBF069141--3e-35At1g25540PFT1 (PHYTOCHROME AND FLOWERING TIME 1)O.I.C.G.S.X.
0.021e+036OsAffx.28442.1.S1_atOryza sativa---0O.I.C.G.S.X.
0.199e-32139PtpAffx.208002.1.S1_x_atPopulus trichocarpapmrna15881hypothetical protein-2e-59At1g25540PFT1 (PHYTOCHROME AND FLOWERING TIME 1)O.I.C.G.S.X.
0.3501164TaAffx.122320.1.S1_atTriticum aestivumBQ620251--2e-8At1g25540PFT1 (PHYTOCHROME AND FLOWERING TIME 1)O.I.C.G.S.X.
0.022e-1361607675_atVitis viniferaCD011506hypothetical protein LOC100253466-3e-11At1g07570APK1AO.I.C.G.S.X.
0.156e-1891Zm.4762.1.A1_atZea maysBG874087--2e-6At1g25540PFT1 (PHYTOCHROME AND FLOWERING TIME 1)O.I.C.G.S.X.



Back to the CoP portal site

Back to the KAGIANA project homepage