Homology analysis

Gene ID Contig12988_at
Gene name
Functional description Similar to At5g55970: zinc finger (C3HC4-type RING finger) family protein (Ev=5e-1)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.920908Contig12989_x_atContig12989--5e-1At5g55970zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.S.X.
0.920908Contig12989_atContig12989--5e-1At5g55970zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.S.X.
0.351e-120432HVSMEg0010K10r2_atHVSMEg0010K10r2--9e-1At5g52200unknown proteinO.I.C.G.S.X.
0.302e-110398HVSMEm0007M05r2_s_atHVSMEm0007M05r2--8e-2At5g55970zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.S.X.
0.272e-109395Contig5171_atContig5171--1e-1At5g55970zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.S.X.
0.341e-108393HK03P05r_atHK03P05r--4e-3At2g35860FLA16 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 PRECURSOR)O.I.C.G.S.X.
0.331e-108393EBro07_SQ002_K15_x_atEBro07_SQ002_K15--6e-2At5g26717-O.I.C.G.S.X.
0.264e-108391Contig1497_s_atContig1497--1e-1At3g20360meprin and TRAF homology domain-containing protein / MATH domain-containing proteinO.I.C.G.S.X.
0.224e-108391Contig13209_atContig13209--6e-1At4g39070zinc finger (B-box type) family proteinO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.025e-136At5g55970Arabidopsis thaliana835695zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:chloroplast;PMOFV---O.I.C.G.S.X.
0.037e-136GmaAffx.52566.1.S1_atGlycine maxAI959822--2e-4At3g08950electron transport SCO1/SenC family proteinO.I.C.G.S.X.
0.104e-28127Os06g0106100Oryza sativaAK112060.1-Cwf15/Cwc15 cell cycle control protein familyprotein6e-10At3g13200EMB2769 (EMBRYO DEFECTIVE 2769)O.I.C.G.S.X.
0.037e-136PtpAffx.15197.1.S1_atPopulus trichocarpaCX181414hypothetical protein-1e-3At4g25225unknown proteinO.I.C.G.S.X.
0.131e-20101TaAffx.58389.1.S1_atTriticum aestivumCA620022--1e+0At5g17870PSRP6 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 6)O.I.C.G.S.X.
0.022e+0321620592_atVitis viniferaCF515947--1e+0At5g41450zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.S.X.
0.104e-21101Zm.2245.1.A1_atZea maysCF625725pre-mRNA-splicing factor cwc15-6e-7At3g13200EMB2769 (EMBRYO DEFECTIVE 2769)O.I.C.G.S.X.



Back to the CoP portal site

Back to the KAGIANA project homepage