Homology analysis

Gene ID Contig1210_at
Gene name
Functional description Similar to At5g53120: SPDS3 (SPERMIDINE SYNTHASE 3) (Ev=2e-16)

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.340793Contig1203_atContig1203--9e-33At5g56010HSP81-3O.I.C.G.S.X.
0.472e-148525Contig4092_atContig4092--1e-2At5g53120SPDS3 (SPERMIDINE SYNTHASE 3)O.I.C.G.S.X.
0.011e-138Contig14176_atContig14176--5e-1At1g16210unknown proteinO.I.C.G.S.X.
0.021e-138Contig5528_atContig5528--2e-1At1g21530AMP-binding protein, putativeO.I.C.G.S.X.
0.014e-136Contig11632_atContig11632--4e-2At2g37080myosin heavy chain-relatedO.I.C.G.S.X.
0.014e-136Contig6759_atContig6759--2e-5At3g55980SZF1 (SALT-INDUCIBLE ZINC FINGER 1)O.I.C.G.S.X.
0.022e+034Contig17699_atContig17699--2e-11At5g40150peroxidase, putativeO.I.C.G.S.X.
0.012e+034Contig16000_atContig16000--4e-1At1g66180aspartyl protease family proteinO.I.C.G.S.X.
0.022e+034Contig17296_atContig17296--4e+0At5g02650unknown proteinO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.282e-1687At5g53120Arabidopsis thaliana835392SPDS3 (SPERMIDINE SYNTHASE 3)encodes a novel spermine synthase and is a paralog of previously characterized spermidine synthases, SPDS1 and SPDS2. SPDS3 forms heterodimers with SDPS2, which in turn forms heterodimers with SDPS1 in vivo. The gene does not complement speDelta3 deficiency of spermidine synthase in yeast but DOES complement speDelta4 deficiency.---O.I.C.G.S.X.
0.172e-242GmaAffx.87908.1.S1_atGlycine maxBM270150--2e-23At5g53120SPDS3 (SPERMIDINE SYNTHASE 3)O.I.C.G.S.X.
0.530644Os06g0528600Oryza sativaAB098063.1-Spermidine synthase 1 (EC 2.5.1.16) (Putrescineaminopropyltransferase 1) (SPDSY 1)1e-8At5g53120SPDS3 (SPERMIDINE SYNTHASE 3)O.I.C.G.S.X.
0.142e-20101Ptp.7547.1.S1_atPopulus trichocarpaBI120806hypothetical protein-3e-29At5g53120SPDS3 (SPERMIDINE SYNTHASE 3)O.I.C.G.S.X.
0.8201164Ta.9393.2.S1_s_atTriticum aestivumCD933620--5e-24At5g53120SPDS3 (SPERMIDINE SYNTHASE 3)O.I.C.G.S.X.
0.052e-8591609980_a_atVitis viniferaCA818363spermine synthase-4e+0At5g53120SPDS3 (SPERMIDINE SYNTHASE 3)O.I.C.G.S.X.
0.530954Zm.6006.1.A1_atZea maysAY110392.1spermidine synthase 1-7e-14At5g53120SPDS3 (SPERMIDINE SYNTHASE 3)O.I.C.G.S.X.



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