CoP: Co-expressed Biological Processes

Homology analysis

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional Description	O.I.	C.G.	S.X.
0.15	9e-8	57	At4g36740	829827	ATHB40 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 40)	Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.	O.I.	C.G.	S.X.
0.05	1e-6	54	At2g18550	816370	HB-2 (HOMEOBOX-2)	Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.	O.I.	C.G.	S.X.
0.04	2e-5	50	At5g03790	831723	HB51	Encodes a homeodomain leucine zipper class I (HD-Zip I) meristem identity regulator that acts together with LFY to induce CAL expression. It binds to the CAL promoter proximal CAATNATTG element. LMI1 acts primarily downstream of LFY in meristem identity regulation. The interaction between LFY, LMI1 and CAL resembles a feed-forward loop transcriptional network motif. The gene also had additional LFY-independent roles in leaf morphogenesis and bract formation.	O.I.	C.G.	S.X.
0.06	4e-4	46	At4g40060	830169	ATHB16 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 16)	Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.	O.I.	C.G.	S.X.
0.03	5e-3	42	At4g17505	827465	unknown protein	F:unknown;P:biological_process unknown;C:endomembrane system;PFB	O.I.	C.G.	S.X.
0.02	2e-2	40	At2g02070	814738	AtIDD5 (Arabidopsis thaliana Indeterminate(ID)-Domain 5)	F:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular, chloroplast;MOFPBAV	O.I.	C.G.	S.X.
0.03	9e-2	38	At5g37550	833733	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	S.X.

HF	Ev	BS	Gene ID	Organism	Repr. ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	S.X.
0.05	8e-3	42	Gma.17923.1.S1_at	Glycine max	AW351287	-	-	2e-6	At3g01470	ATHB-1 (ARABIDOPSIS THALIANA HOMEOBOX 1)	O.I.	C.G.	S.X.
0.03	4e-2	38	Contig10112_at	Hordeum vulgare	Contig10112	-	-	1e-4	At5g65310	ATHB5 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 5)	O.I.	C.G.	S.X.
0.03	1e-2	42	Os09g0379500	Oryza sativa	AK069390.1	-	Conserved hypothetical protein	2e+0	At5g28000	Bet v I allergen family protein	O.I.	C.G.	S.X.
0.04	2e-3	44	PtpAffx.207337.1.S1_s_at	Populus trichocarpa	pmrna14552	hypothetical protein	-	2e-15	At4g36740	ATHB40 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 40)	O.I.	C.G.	S.X.
0.04	9e-2	38	TaAffx.85933.1.S1_at	Triticum aestivum	CA618346	-	-	4e+0	At3g42310	unknown protein	O.I.	C.G.	S.X.
0.04	4e-1	34	1621471_s_at	Vitis vinifera	AB073015.1	Myb transcription factor	-	1e-6	At3g13540	ATMYB5 (MYB DOMAIN PROTEIN 5)	O.I.	C.G.	S.X.
0.04	2e-4	46	Zm.2734.1.A1_at	Zea mays	CK985510	homeodomain leucine zipper protein CPHB-5	-	2e-1	At3g01470	ATHB-1 (ARABIDOPSIS THALIANA HOMEOBOX 1)	O.I.	C.G.	S.X.

Gene ID	At5g66700
Gene name	HB53
Functional description	Encodes a homeodomain protein. Member of HD-ZIP 1 family, most closely related to HB5. AtHB53 is auxin-inducible and its induction is inhibited by cytokinin, especially in roots therefore may be involved in root development.