Homology analysis

Gene ID At5g66700
Gene name HB53
Functional description Encodes a homeodomain protein. Member of HD-ZIP 1 family, most closely related to HB5. AtHB53 is auxin-inducible and its induction is inhibited by cytokinin, especially in roots therefore may be involved in root development.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.159e-857At4g36740829827ATHB40 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 40)Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.O.I.C.G.S.X.
0.051e-654At2g18550816370HB-2 (HOMEOBOX-2)Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.O.I.C.G.S.X.
0.042e-550At5g03790831723HB51Encodes a homeodomain leucine zipper class I (HD-Zip I) meristem identity regulator that acts together with LFY to induce CAL expression. It binds to the CAL promoter proximal CAATNATTG element. LMI1 acts primarily downstream of LFY in meristem identity regulation. The interaction between LFY, LMI1 and CAL resembles a feed-forward loop transcriptional network motif. The gene also had additional LFY-independent roles in leaf morphogenesis and bract formation.O.I.C.G.S.X.
0.064e-446At4g40060830169ATHB16 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 16)Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.O.I.C.G.S.X.
0.035e-342At4g17505827465unknown proteinF:unknown;P:biological_process unknown;C:endomembrane system;PFBO.I.C.G.S.X.
0.022e-240At2g02070814738AtIDD5 (Arabidopsis thaliana Indeterminate(ID)-Domain 5)F:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular, chloroplast;MOFPBAVO.I.C.G.S.X.
0.039e-238At5g37550833733unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.058e-342Gma.17923.1.S1_atGlycine maxAW351287--2e-6At3g01470ATHB-1 (ARABIDOPSIS THALIANA HOMEOBOX 1)O.I.C.G.S.X.
0.034e-238Contig10112_atHordeum vulgareContig10112--1e-4At5g65310ATHB5 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 5)O.I.C.G.S.X.
0.031e-242Os09g0379500Oryza sativaAK069390.1-Conserved hypothetical protein2e+0At5g28000Bet v I allergen family proteinO.I.C.G.S.X.
0.042e-344PtpAffx.207337.1.S1_s_atPopulus trichocarpapmrna14552hypothetical protein-2e-15At4g36740ATHB40 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 40)O.I.C.G.S.X.
0.049e-238TaAffx.85933.1.S1_atTriticum aestivumCA618346--4e+0At3g42310unknown proteinO.I.C.G.S.X.
0.044e-1341621471_s_atVitis viniferaAB073015.1Myb transcription factor-1e-6At3g13540ATMYB5 (MYB DOMAIN PROTEIN 5)O.I.C.G.S.X.
0.042e-446Zm.2734.1.A1_atZea maysCK985510homeodomain leucine zipper protein CPHB-5-2e-1At3g01470ATHB-1 (ARABIDOPSIS THALIANA HOMEOBOX 1)O.I.C.G.S.X.

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