Homology analysis

Gene ID At5g65420
Gene name CYCD4
Functional description Encodes a D-type cyclin CYCD4;1 that physically interacts with CDC2A and is expressed during vascular tissue development, embryogenesis, and formation of lateral root primordia. Its expression is upregulated early during germination.Involved in stomatal cell lineage proliferation in the hypocotyl.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.603e-82305At5g10440830908CYCD4Encodes a cyclin involved in cell proliferation during stomatal cell lineage development.O.I.C.G.S.X.
0.101e-448At2g22490816782CYCD2encodes a D-type cyclin whose transcription level is regulated by sucrose but not phytohormones or nitrate. Protein physically interacts with CDC2A. CycD2 kinase activity is regulated by sequestration of CycD2 protein in a form inaccessible to immunoprecipitation and probably not complexed to CDC2A.O.I.C.G.S.X.
0.013e-240At5g56360835736calmodulin-binding proteinF:calmodulin binding;P:unknown;C:endomembrane system;MOBFPVAO.I.C.G.S.X.
0.011e-138At3g19210821455ATRAD54 (ARABIDOPSIS HOMOLOG OF RAD54)Encodes RAD54, a member of the SWI2/SNF2 family of DNA-stimulated ATPases. Functions in DNA repair via homologous recombination.O.I.C.G.S.X.
0.035e-136Atmg01300--hypothetical proteinO.I.C.G.S.X.
0.025e-136At5g67260836861CYCD3Encode CYCD3;2, a CYCD3 D-type cyclin. Important for determining cell number in developing lateral organs. Mediating cytokinin effects in apical growth and development.O.I.C.G.S.X.
0.015e-136At5g08720830772-F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;OBPAMO.I.C.G.S.X.
0.015e-136At5g04990830381sad1/unc-84 protein-relatedF:molecular_function unknown;P:biological_process unknown;C:nuclear envelope, endoplasmic reticulum;MOFBPAO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.072e-448GmaAffx.15397.1.S1_atGlycine maxBU927489--1e-2At2g22490CYCD2O.I.C.G.S.X.
0.032e-136HI15D16r_atHordeum vulgareHI15D16r--3e+0At3g61160shaggy-related protein kinase beta / ASK-beta (ASK2)O.I.C.G.S.X.
0.032e-138Os01g0614800Oryza sativa9629.m04112--3e-1At5g28630glycine-rich proteinO.I.C.G.S.X.
0.103e-344PtpAffx.205445.1.S1_atPopulus trichocarpapmrna10768hypothetical protein-2e-3At5g65420CYCD4O.I.C.G.S.X.
0.035e-136TaAffx.81687.1.S1_atTriticum aestivumCA683004--1e-12At2g01170BAT1 (BIDIRECTIONAL AMINO ACID TRANSPORTER 1)O.I.C.G.S.X.
0.032e+0321622401_atVitis viniferaCF403548--3e+0At5g62100ATBAG2 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 2)O.I.C.G.S.X.
0.028e-134Zm.13280.1.S1_atZea maysCA826511--4e+0At5g18748unknown proteinO.I.C.G.S.X.



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