Homology analysis

Gene ID At5g64920
Functional description Encodes a RING-H2 protein that interacts with the RING finger domain of COP1. CIP8 exhibits a strong interaction with the E2 ubiquitin conjugating enzyme AtUBC8 through its N-terminal domain and promotes ubiquitination in an E2-dependent fashion in vitro. It is possible that the AtUBC8-CIP8 module might interact with COP1 in vivo, thereby participating in proteasome-mediated degradation of HY5.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.025e-446At5g62500836370ATEB1B (END BINDING PROTEIN 1B)encodes a homolog of animal microtubule-end-binding protein. There are two other members of this family. EB1 forms foci at regions where the minus ends of microtubules are gathered during mitosis and early cytokinesis.O.I.C.G.S.X.
0.025e-446At4g12740826886adenine-DNA glycosylase-related / MYH-relatedF:hydrolase activity, 4 iron, 4 sulfur cluster binding, catalytic activity, endonuclease activity;P:DNA repair, base-excision repair;C:unknown;MOBFPVAO.I.C.G.S.X.
0.012e-344At5g45200834556disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAO.I.C.G.S.X.
0.022e-344At3g07120819898zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;MOFPVBAO.I.C.G.S.X.
0.032e-344At2g32710817831KRP4Kip-related protein (KRP) gene, encodes CDK (cyclin-dependent kinase) inhibitor (CKI). A member of seven KRP genes found in Arabidopsis thaliana. Negative regulator of cell division. Expressed in actively dividing cells.O.I.C.G.S.X.
0.012e-344At2g31880817746leucine-rich repeat transmembrane protein kinase, putativeEncodes a putative leucine rich repeat transmembrane protein that is expressed in response to Pseudomonas syringae. Expression of SRRLK may be required for silencing via lsiRNAs.O.I.C.G.S.X.
0.042e-344At2g26940817235zinc finger (C2H2 type) family proteinF:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;MPOFO.I.C.G.S.X.
0.032e-344At1g18790838461RWP-RK domain-containing proteinF:transcription factor activity;P:regulation of transcription;C:cellular_component unknown;PMOBO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.037e-446HgAffx.901.1.S1_atGlycine maxCK351789--2e-4At2g26940zinc finger (C2H2 type) family proteinO.I.C.G.S.X.
0.046e-238HF21N04r_atHordeum vulgareHF21N04r--2e+0At4g19150ankyrin repeat family proteinO.I.C.G.S.X.
0.047e-550OsAffx.28133.1.S1_atOryza sativa---0O.I.C.G.S.X.
0.031e-242Ptp.6336.1.S1_s_atPopulus trichocarpaCF231314hypothetical protein-3e-7At3g52040unknown proteinO.I.C.G.S.X.
0.031e-138TaAffx.37964.1.S1_atTriticum aestivumBJ257083--7e-2At5g64920CIP8 (COP1-INTERACTING PROTEIN 8)O.I.C.G.S.X.
0.032e-3421620337_atVitis viniferaCF213940similar to ATCNGC5 (CYCLIC NUCLEOTIDE GATED CHANNEL 5); calmodulin binding / cyclic nucleotide binding / potassium channel-2e-5At5g62500ATEB1B (END BINDING PROTEIN 1B)O.I.C.G.S.X.
0.031e-550Zm.8561.2.A1_a_atZea maysBM332166hypothetical protein LOC100277438-4e+0At4g05070unknown proteinO.I.C.G.S.X.

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