Homology analysis

Gene ID At5g62520
Gene name SRO5 (SIMILAR TO RCD ONE 5)
Functional description Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. Up-regulated by NaCl. SRO5 and P5CDH (an overlapping gene in the antisense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.076e-22105At3g47720823926SRO4 (SIMILAR TO RCD ONE 4)Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation.O.I.C.G.S.X.
0.032e-654At1g23550838965SRO2 (SIMILAR TO RCD ONE 2)Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation.O.I.C.G.S.X.
0.015e-136At4g18600827594WAVE5Encodes a member of the SCAR family.These proteins are part of a complex (WAVE) complex.The SCAR subunit activates the ARP2/3 complex which in turn act as a nucleator for actin filaments.O.I.C.G.S.X.
0.015e-136At4g00450827954CRP (CRYPTIC PRECOCIOUS)A genetic locus involved in flowering time. The mutant enhances the expression of the flowering time (FT) gene. A knockout mutant of this gene showed late-flowering phenotype.O.I.C.G.S.X.
0.025e-136At3g04000819555short-chain dehydrogenase/reductase (SDR) family proteinF:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:unknown;BOMFPAVO.I.C.G.S.X.
0.015e-136At2g38010818379ceramidase family proteinF:ceramidase activity;P:unknown;C:endomembrane system;MBFOPO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.036e-136GmaAffx.36250.1.S1_s_atGlycine maxBG551078--2e-1At5g62520SRO5 (SIMILAR TO RCD ONE 5)O.I.C.G.S.X.
0.034e+032HB09A11w_atHordeum vulgareHB09A11w--6e+0At5g03545unknown proteinO.I.C.G.S.X.
0.029e-136Os12g0149700Oryza sativaAK122055.1-Serine/threonine protein kinase family protein5e-2At3g12690AGC1.5 (AGC KINASE 1.5)O.I.C.G.S.X.
0.082e-1067PtpAffx.210568.1.S1_atPopulus trichocarpapmrna20731hypothetical protein-3e-17At3g47720SRO4 (SIMILAR TO RCD ONE 4)O.I.C.G.S.X.
0.048e+032TaAffx.52668.1.S1_atTriticum aestivumCA703790--4e+0At5g62520SRO5 (SIMILAR TO RCD ONE 5)O.I.C.G.S.X.
0.032e+0321613563_atVitis viniferaCD800993--2e+1Atcg00770-O.I.C.G.S.X.
0.023e+032Zm.2494.1.A1_atZea maysBE129776--3e+0At5g62520SRO5 (SIMILAR TO RCD ONE 5)O.I.C.G.S.X.



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