Homology analysis

Gene ID At5g62210
Gene name embryo-specific protein-related
Functional description F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;MPOFVBA

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.111e-654At5g07190830610ATS3 (ARABIDOPSIS THALIANA SEED GENE 3)Gene is expressed preferentially in the embryo and encodes a unique protein of unknown function.O.I.C.G.S.X.
0.069e-548At5g66815836815unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.S.X.
0.038e-238At5g67060836841HEC1 (HECATE 1)F:transcription factor activity;P:transmitting tissue development, carpel formation, regulation of transcription;C:nucleus;PMBOFAO.I.C.G.S.X.
0.028e-238At3g22800821851leucine-rich repeat family protein / extensin family proteinF:structural constituent of cell wall, protein binding;P:unknown;C:endomembrane system;MPBOFVAO.I.C.G.S.X.
0.038e-238At2g30130817565ASL5Overexpression/activation tagged allele has epinastic leaves, reduced apical dominance and is sterile. Gene is similar to asymmetric leaves (AS)/lateral organ boundary (LOB) genes which repress KNOX gene expression.O.I.C.G.S.X.
0.028e-238At1g67770843102TEL2 (TERMINAL EAR1-LIKE 2)Similar to terminal ear1 in Zea mays. A member of mei2-like gene family; phylogenetic analysis revealed that TEL2 belongs to the third clade of mei2-like proteins (TEL clade), with conserved two N-terminal RNA recognition motifs (RRM), in addition to the C-terminal RRM, shared among all mei2-like proteins. Expression patterns were similar to TEL1, with lower expression levels in most tissues examined.O.I.C.G.S.X.
0.023e-136At5g27300832788-F:molecular_function unknown;P:biological_process unknown;C:unknown;POMFAO.I.C.G.S.X.
0.033e-136At5g48170834869SLY2 (SLEEPY2)encodes an F-box protein whose protein sequence is similar to SLY1, which belongs to SCF-SLY1 E3 ligase complex. SCF-SLY1 E3 ligase degrades DELLA proteins that are involved in promoting growth. Overexpression of SLY2 can partially compensate sly1-10 mutant phenotype of dwarfism.O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.055e-446PsAffx.psMC008xL10f_atGlycine maxPsAffx.psMC008xL10f--1e+1At3g15780unknown proteinO.I.C.G.S.X.
0.044e-238Contig8778_s_atHordeum vulgareContig8778--2e-2At3g10185-O.I.C.G.S.X.
0.044e-240Os11g0536000Oryza sativa9639.m03008-Hypothetical protein4e-1At4g32030unknown proteinO.I.C.G.S.X.
0.045e-136PtpAffx.221669.1.S1_s_atPopulus trichocarpapmrna38669hypothetical protein-2e+0At3g27831-O.I.C.G.S.X.
0.059e-238TaAffx.113217.1.S1_atTriticum aestivumCA617215--2e+0At5g52940unknown proteinO.I.C.G.S.X.
0.033e-2381614322_atVitis viniferaCB834359--3e-1At5g17460unknown proteinO.I.C.G.S.X.
0.034e-238Zm.8848.1.A1_atZea maysBM075900--1e-2At5g44570unknown proteinO.I.C.G.S.X.



Back to the CoP portal site

Back to the KAGIANA project homepage