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| Gene ID | At5g60600 |
| Gene name | HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE) |
| Functional description | Encodes a chloroplast-localized hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) synthase (HDS), catalyzes the formation of HMBPP from 2-C-methyl-D-erythrytol 2,4-cyclodiphosphate (MEcPP). The HDS enzyme controls the penultimate steps of the biosynthesis of IPP and dimethylallyl diphosphate (DMAPP) via the MEP pathway and may serve as a metabolic control point for SA-mediated disease resistance. In the light, the electrons required for the reaction catalyzed by HDS are directly provided by the electron flow from photosynthesis via ferredoxin. In the dark however, the enzyme requires an electron shuttle: ferredoxin-NADP+ reductase. |
| HF | Ev | BS | Gene ID | Repr. ID | Gene Name | Functional Description | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|
| 0.01 | 3e-1 | 38 | At4g02030 | 828155 | - | F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPBV | O.I. | C.G. | S.X. | |
| 0.01 | 1e+0 | 36 | At3g10820 | 820251 | DNA binding / protein binding / transcription regulator | F:protein binding, transcription regulator activity, DNA binding;P:transcription;C:nucleus;MPOF | O.I. | C.G. | S.X. | |
| 0.01 | 1e+0 | 36 | At2g25170 | 817055 | PKL (PICKLE) | Encodes a SWI/SWF nuclear-localized chromatin remodeling factor of the CHD3 group. Involved in post-germination repression of embryonic development. Acts with GA to establish repression of embryonic genes upon germination. Protein preferentially accumulates in differentiating tissues. Loss of function alleles are associated with expression of embryonic traits in adult plants and derepression of embryonic genes such as PHEROS1. Is an extragenic suppressor of slr2 (SSL2). Mutations in PKL (SSL2) restores lateral root formation in the slr2 mutant slr-1. It was proposed that PKL/SSL2-mediated chromatin remodeling negatively regulates auxin-mediated LR formation in Arabidopsis. | O.I. | C.G. | S.X. | |
| 0.01 | 1e+0 | 36 | At1g80170 | 844357 | polygalacturonase, putative / pectinase, putative | F:polygalacturonase activity;P:carbohydrate metabolic process;C:plant-type cell wall;FPBOMA | O.I. | C.G. | S.X. | |
| 0.01 | 4e+0 | 34 | Atmg00260 | - | - | hypothetical protein | O.I. | C.G. | S.X. | |
| 0.01 | 4e+0 | 34 | At5g67540 | 836890 | glycosyl hydrolase family protein 43 | F:hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:cellular_component unknown;BFOPM | O.I. | C.G. | S.X. | |
| 0.01 | 4e+0 | 34 | At5g64570 | 836578 | XYL4 | Encodes a beta-d-xylosidase that belongs to family 3 of glycoside hydrolases. | O.I. | C.G. | S.X. |
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