Back to the CoP portal site
Back to the KAGIANA project homepage
| Gene ID | At5g59820 |
| Gene name | RHL41 (RESPONSIVE TO HIGH LIGHT 41) |
| Functional description | Encodes a zinc finger protein involved in high light and cold acclimation. Overexpression of this putative transcription factor increases the expression level of 9 cold-responsive genes and represses the expression level of 15 cold-responsive genes, including CBF genes. Also, lines overexpressing this gene exhibits a small but reproducible increase in freeze tolerance. Because of the repression of the CBF genes by the overexpression of this gene, the authors speculate that this gene may be involved in negative regulatory circuit of the CBF pathway. |
| HF | Ev | BS | Gene ID | Repr. ID | Gene Name | Functional Description | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|
| 0.23 | 1e-21 | 103 | At3g46090 | 823752 | ZAT7 | F:transcription factor activity, zinc ion binding, nucleic acid binding;P:response to chitin, regulation of transcription;C:intracellular;PMO | O.I. | C.G. | S.X. | |
| 0.31 | 1e-15 | 83 | At3g46080 | 823751 | zinc finger (C2H2 type) family protein | F:transcription factor activity, zinc ion binding, nucleic acid binding;P:response to chitin, regulation of transcription;C:intracellular;PMO | O.I. | C.G. | S.X. | |
| 0.28 | 2e-11 | 69 | At3g46070 | 823750 | zinc finger (C2H2 type) family protein | F:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;PMO | O.I. | C.G. | S.X. | |
| 0.10 | 3e-4 | 46 | At5g03510 | 831818 | zinc finger (C2H2 type) family protein | F:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;MPO | O.I. | C.G. | S.X. | |
| 0.05 | 1e-3 | 44 | At2g28710 | 817420 | zinc finger (C2H2 type) family protein | F:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;PMO | O.I. | C.G. | S.X. | |
| 0.03 | 6e-2 | 38 | At1g10480 | 837588 | ZFP5 (ZINC FINGER PROTEIN 5) | Encodes a zinc finger protein containing only a single zinc finger. | O.I. | C.G. | S.X. | |
| 0.03 | 2e-1 | 36 | At3g17170 | 820974 | RFC3 (REGULATOR OF FATTY-ACID COMPOSITION 3) | F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:ribosome, intracellular, chloroplast;MOBFPVA | O.I. | C.G. | S.X. | |
| 0.03 | 2e-1 | 36 | At2g46270 | 819235 | GBF3 (G-BOX BINDING FACTOR 3) | encodes a bZIP G-box binding protein whose expression is induced by ABA. It has been shown to bind to Adh that contains the G-box and is induced by cold and water deprivation. GBF3 has been shown to be expressed mostly in the root and dark-grown leaves. GBF3 can act as homodimers and as heterodimers with GFB1, GBF2 and GBF4. In addition, GBF3¡¯s DNA binding activity is enhanced by GIP1, GPRI1 and GPRI2. | O.I. | C.G. | S.X. |
| HF | Ev | BS | Gene ID | Organism | Repr. ID | Gene Name | Functional Description | Ev | AGI code | Arabidopsis gene name | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.13 | 4e-10 | 65 | GmaAffx.54770.1.S1_at | Glycine max | BI321317 | - | - | 1e-10 | At5g59820 | RHL41 (RESPONSIVE TO HIGH LIGHT 41) | O.I. | C.G. | S.X. | |
| 0.04 | 1e-1 | 36 | Contig17991_at | Hordeum vulgare | Contig17991 | - | - | 3e+0 | Atmg00490 | - | O.I. | C.G. | S.X. | |
| 0.04 | 2e+0 | 34 | Os.21830.1.S1_at | Oryza sativa | - | - | - | 0 | O.I. | C.G. | S.X. | |||
| 0.11 | 4e-7 | 56 | Ptp.7321.1.S1_at | Populus trichocarpa | DN498339 | hypothetical protein | - | 1e-1 | At2g28710 | zinc finger (C2H2 type) family protein | O.I. | C.G. | S.X. | |
| 0.04 | 4e+0 | 32 | TaAffx.86552.1.S1_x_at | Triticum aestivum | CA605903 | Urate oxidase | - | 3e+0 | At5g59820 | RHL41 (RESPONSIVE TO HIGH LIGHT 41) | O.I. | C.G. | S.X. | |
| 0.04 | 4e+0 | 30 | 1622241_x_at | Vitis vinifera | CF205868.1 | - | - | 4e-1 | At2g22155 | - | O.I. | C.G. | S.X. | |
| 0.05 | 1e-1 | 36 | ZmAffx.844.1.A1_at | Zea mays | AI770609 | - | - | 1e-1 | At5g59820 | RHL41 (RESPONSIVE TO HIGH LIGHT 41) | O.I. | C.G. | S.X. |
Back to the CoP portal site
Back to the KAGIANA project homepage