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| Gene ID | At5g59710 |
| Gene name | VIP2 (VIRE2 INTERACTING PROTEIN2) |
| Functional description | Encodes a nuclear-localized NOT (negative on TATA-less) domain-containing protein that interacts with the Agrobacterium VirE2 protein and is required for Agrobacterium-mediated plant transformation. It likely facilitates T-DNA integration into plant chromosomes and may play a role as a transcriptional regulator. |
| HF | Ev | BS | Gene ID | Repr. ID | Gene Name | Functional Description | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|
| 0.24 | 5e-30 | 133 | At1g07705 | 837284 | transcription regulator | F:transcription regulator activity;P:regulation of transcription;C:nucleus, chloroplast;MOBFPV | O.I. | C.G. | S.X. | |
| 0.01 | 9e-1 | 36 | At2g47990 | 819411 | SWA1 (SLOW WALKER1) | Encodes a transducin family nucleolar protein with six WD40 repeats that is most likely involved in 18S rRNA biogenesis. The slow progression of the gametophytic division cycles in swa1 suggested that the SWA1 protein is required for the normal progression of mitotic division cycles through the regulation of cell metabolism. Ubiquitously expressed throughout the plant. | O.I. | C.G. | S.X. | |
| 0.01 | 9e-1 | 36 | At1g75110 | 843848 | RRA2 (REDUCED RESIDUAL ARABINOSE 2) | F:unknown;P:unknown;C:endoplasmic reticulum;PO | O.I. | C.G. | S.X. | |
| 0.01 | 4e+0 | 34 | At5g50720 | 835144 | ATHVA22E | Encodes one of five HVA22 homologs in Arabidopsis. HVA22 is an ABA- and stress-inducible gene first isolated from barley. Members of this gene family have only been found in eukaryotes. AtHVA22e mRNA is upregulated to varying degrees in response to cold stress, salt stress, ABA treatment or dehydration. | O.I. | C.G. | S.X. | |
| 0.01 | 4e+0 | 34 | At5g45520 | 834588 | unknown protein | F:molecular_function unknown;P:biological_process unknown;C:chloroplast;MOBFPVA | O.I. | C.G. | S.X. | |
| 0.01 | 4e+0 | 34 | At5g56730 | 835774 | peptidase M16 family protein / insulinase family protein | F:metalloendopeptidase activity, catalytic activity, zinc ion binding, metal ion binding;P:proteolysis;C:mitochondrion, chloroplast, plastid;BOMFPAV | O.I. | C.G. | S.X. | |
| 0.01 | 4e+0 | 34 | At5g10270 | 830891 | CDKC | Encodes CDKC;1, part of a CDKC kinase complex that is targeted by Cauliflower mosaic virus (CaMV) for transcriptional activation of viral genes. Also regulates plant growth and development. | O.I. | C.G. | S.X. |
| HF | Ev | BS | Gene ID | Organism | Repr. ID | Gene Name | Functional Description | Ev | AGI code | Arabidopsis gene name | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.22 | 4e-19 | 97 | GmaAffx.83592.1.S1_at | Glycine max | BU761888 | - | - | 1e-19 | At5g59710 | VIP2 (VIRE2 INTERACTING PROTEIN2) | O.I. | C.G. | S.X. | |
| 0.02 | 7e+0 | 32 | HB23F22r_at | Hordeum vulgare | HB23F22r | - | - | 3e+0 | At3g58010 | unknown protein | O.I. | C.G. | S.X. | |
| 0.07 | 5e-13 | 77 | Os03g0736000 | Oryza sativa | AK099785.1 | - | NOT2/NOT3/NOT5 family protein | 5e-13 | At5g59710 | VIP2 (VIRE2 INTERACTING PROTEIN2) | O.I. | C.G. | S.X. | |
| 0.10 | 5e-3 | 44 | PtpAffx.10658.1.S1_at | Populus trichocarpa | DN500790 | - | - | 6e-4 | At1g07705 | transcription regulator | O.I. | C.G. | S.X. | |
| 0.03 | 2e-8 | 61 | Ta.6738.1.S1_at | Triticum aestivum | BJ217244 | - | - | 2e-8 | At5g59710 | VIP2 (VIRE2 INTERACTING PROTEIN2) | O.I. | C.G. | S.X. | |
| 0.05 | 2e-2 | 40 | 1615412_at | Vitis vinifera | BQ796592 | hypothetical protein LOC100263354 | - | 2e-2 | At5g59710 | VIP2 (VIRE2 INTERACTING PROTEIN2) | O.I. | C.G. | S.X. | |
| 0.06 | 2e-12 | 73 | Zm.3513.1.A1_at | Zea mays | CA404391 | - | - | 6e-5 | At1g07705 | transcription regulator | O.I. | C.G. | S.X. |
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