Homology analysis

Gene ID At5g58040
Gene name ATFIP1[V] (Arabidopsis homolog of yeast Fip1 [V])
Functional description Encodes a subunit of the polyadenylation apparatus that interacts with and stimulates the activity of poly(A) polymerase. Additionally , it interacts with several polyadenylation factor subunits and is an RNA-binding protein. It is suggested that this protein coordinates a number of polyadenylation factor subunits with PAP and with RNA.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.012e-346At3g01080821213WRKY58member of WRKY Transcription Factor; Group IO.I.C.G.S.X.
0.017e-344At4g19550827697transcription regulator/ zinc ion bindingF:transcription regulator activity, zinc ion binding;P:regulation of transcription, DNA-dependent, transcription initiation;C:transcription factor complex;OMPFBVO.I.C.G.S.X.
0.017e-344At2g20280816547zinc finger (CCCH-type) family proteinF:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MOFPVBAO.I.C.G.S.X.
0.013e-242At5g12470831122unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion, chloroplast, plastid, chloroplast inner membrane, chloroplast envelope;PMBOVFO.I.C.G.S.X.
0.013e-242At5g08230830719PWWP domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOBFVAO.I.C.G.S.X.
0.013e-242At4g05410825889transducin family protein / WD-40 repeat family proteinF:nucleotide binding, nucleic acid binding;P:mitochondrial fission;C:nucleolus, small nucleolar ribonucleoprotein complex, anaphase-promoting complex, CUL4 RING ubiquitin ligase complex;MFOBPVAO.I.C.G.S.X.
0.013e-242At2g34970818061eIF4-gamma/eIF5/eIF2-epsilon domain-containing proteinF:binding, transferase activity, translation initiation factor activity, nucleotidyltransferase activity;P:biosynthetic process, regulation of translational initiation;C:unknown;BOMAFPO.I.C.G.S.X.
0.011e-140At5g15140831366aldose 1-epimerase family proteinF:aldose 1-epimerase activity;P:galactose metabolic process, hexose metabolic process, carbohydrate metabolic process;C:endomembrane system;OBMFPVAO.I.C.G.S.X.
0.011e-140At5g13680831213ABO1 (ABA-OVERLY SENSITIVE 1)A subunit of Elongator, a histone acetyl transferase complex, consisting of six subunits (ELP1–ELP6), that copurifies with the elongating RNAPII in yeast and humans. Three Arabidopsis thaliana genes, encoding homologs of the yeast Elongator subunits ELP1, ELP3 (histone acetyl transferase), and ELP4 are responsible for the narrow leaf phenotype in elongata mutants and for reduced root growth that results from a decreased cell division rate.O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.011e-244Gma.2911.2.S1_a_atGlycine maxBU926887--2e-9At4g26110NAP1O.I.C.G.S.X.
0.012e-138Contig4512_s_atHordeum vulgareContig4512--2e-2At2g22080unknown proteinO.I.C.G.S.X.
0.012e-140Os10g0429200Oryza sativa9638.m02506--9e-1At4g39750F-box family protein-relatedO.I.C.G.S.X.
0.091e-29133PtpAffx.206505.1.S1_atPopulus trichocarpapmrna12905hypothetical protein-1e-29At5g58040ATFIP1[V] (Arabidopsis homolog of yeast Fip1 [V])O.I.C.G.S.X.
0.021e-450TaAffx.65630.1.S1_atTriticum aestivumBJ235341--3e+0At4g30410transcription factorO.I.C.G.S.X.
0.022e-12731609078_a_atVitis viniferaBQ794194hypothetical protein LOC100251960-3e-1At4g27120unknown proteinO.I.C.G.S.X.
0.012e-448Zm.9120.1.A1_atZea maysBM348766--9e-2At3g25572CPuORF11 (Conserved peptide upstream open reading frame 11)O.I.C.G.S.X.



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