Homology analysis

Gene ID At5g57090
Gene name EIR1 (ETHYLENE INSENSITIVE ROOT 1)
Functional description Encodes an auxin efflux carrier that is similar to bacterial membrane transporters. Root-specific role in the transport of auxin. Acts downstream of CTR1 and ethylene biosynthesis, in the same pathway as EIN2 and AUX1, and independent from EIN3 and EIN5/AIN1 pathway. In the root, the protein localizes apically in epidermal and lateral root cap cells and predominantly basally in cortical cells. Functions may be regulated by phosphorylation status. EIR1 expression is induced by brassinolide treatment in the brassinosteroid-insensitive br1 mutant. Gravistimulation resulted in asymmetric PIN2 distribution, with more protein degraded at the upper side of the gravistimulated root. Protein turnover is affected by the proteasome and by endosomal cycling. Plasma membrane-localized PIN proteins mediate a saturable efflux of auxin. PINs mediate auxin efflux from mammalian and yeast cells without needing additional plant-specific factors. The action of PINs in auxin efflux is distinct from PGPs, rate-limiting, specific to auxins and sensitive to auxin transport inhibitors. Membrane sterol composition is essential for the acquisition of PIN2 polarity.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.075e-21103At1g70940843432PIN3 (PIN-FORMED 3)A regulator of auxin efflux and involved in differential growth. PIN3 is expressed in gravity-sensing tissues, with PIN3 protein accumulating predominantly at the lateral cell surface. PIN3 localizes to the plasma membrane and to vesicles. In roots, PIN3 is expressed without pronounced polarity in tiers two and three of the columella cells, at the basal side of vascular cells, and to the lateral side of pericycle cells of the elongation zone. PIN3 overexpression inhibits root cell growth. Protein phosphorylation plays a role in PIN3 trafficking to the plasma membrane.O.I.C.G.S.X.
0.123e-1997At1g23080838916PIN7 (PIN-FORMED 7)Encodes a novel component of auxin efflux that is located apically in the basal cell and is involved during embryogenesis in setting up the apical-basal axis in the embryo. It is also involved in pattern specification during root development. In roots, it is expressed at lateral and basal membranes of provascular cells in the meristem and elongation zone, whereas in the columella cells it coincides with the PIN3 domain. Plasma membrane-localized PIN proteins mediate a saturable efflux of auxin. PINs mediate auxin efflux from mammalian and yeast cells without needing additional plant-specific factors. The action of PINs in auxin efflux is distinct from PGPs, rate-limiting, specific to auxins and sensitive to auxin transport inhibitors. PINs are directly involved of in catalyzing cellular auxin efflux.O.I.C.G.S.X.
0.163e-1067At1g73590843693PIN1 (PIN-FORMED 1)Encodes an auxin efflux carrier involved in shoot and root development. It is involved in the maintenance of embryonic auxin gradients. Loss of function severely affects organ initiation, pin1 mutants are characterised by an inflorescence meristem that does not initiate any flowers, resulting in the formation of a naked inflorescence stem. PIN1 is involved in the determination of leaf shape by actively promoting development of leaf margin serrations. In roots, the protein mainly resides at the basal end of the vascular cells, but weak signals can be detected in the epidermis and the cortex. Expression levels and polarity of this auxin efflux carrier change during primordium development suggesting that cycles of auxin build-up and depletion accompany, and may direct, different stages of primordium development. PIN1 action on plant development does not strictly require function of PGP1 and PGP19 proteins.O.I.C.G.S.X.
0.122e-552At2g01420814670PIN4 (PIN-FORMED 4)Encodes a putative auxin efflux carrier that is localized in developing and mature root meristems. It is involved in the maintenance of embryonic auxin gradients. A role for AtPIN4 in generating a sink for auxin below the quiescent center of the root meristem that is essential for auxin distribution and patterning is proposed. In the root, PIN4 is detected around the quiescent center and cells surrounding it, and localizes basally in provascular cells. PIN4 expression is upregulated in brassinosteroid-insensitive mutant (PMID 16141452).O.I.C.G.S.X.
0.072e-552At1g77110844046PIN6 (PIN-FORMED 6)Rate-limiting factor in saturable efflux of auxins. PINs are directly involved of in catalyzing cellular auxin efflux.O.I.C.G.S.X.
0.021e-346At3g50870824251MNP (MONOPOLE)mutant has Embryo defect; GATA Factor Transcriptional RegulatorO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.208e-30133GmaAffx.6711.1.S1_atGlycine maxAW350271--2e-30At5g57090EIR1 (ETHYLENE INSENSITIVE ROOT 1)O.I.C.G.S.X.
0.011e-138Contig17437_atHordeum vulgareContig17437--6e+0At2g27250CLV3 (CLAVATA3)O.I.C.G.S.X.
0.196e-1687Os06g0660200Oryza sativaAK101191.1-Auxin efflux carrier component 2 (AtPIN2) (Auxinefflux carrier AGR) (Polar-auxin-transport effluxcomponent AGRAVITROPIC 1) (AtAGR1) (Ethylene insensitiveroot 1) (AtEIR1) (WAVY6)1e-15At1g70940PIN3 (PIN-FORMED 3)O.I.C.G.S.X.
0.358e-27123PtpAffx.214599.1.S1_atPopulus trichocarpapmrna28372auxin efflux carrier component-5e-27At5g57090EIR1 (ETHYLENE INSENSITIVE ROOT 1)O.I.C.G.S.X.
0.235e-963Ta.22220.1.S1_atTriticum aestivumBT008949.1--5e-9At5g57090EIR1 (ETHYLENE INSENSITIVE ROOT 1)O.I.C.G.S.X.
0.122e-14791616135_atVitis viniferaCB348868hypothetical protein LOC100263725-3e-16At1g73590PIN1 (PIN-FORMED 1)O.I.C.G.S.X.
0.081e-757Zm.12687.1.S1_a_atZea maysCO520828auxin efflux carrier component 1c-2e-7At5g57090EIR1 (ETHYLENE INSENSITIVE ROOT 1)O.I.C.G.S.X.



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