Homology analysis

Gene ID At5g54580
Gene name RNA recognition motif (RRM)-containing protein
Functional description F:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:unknown;MPFOBA

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.131e-55216At2g07750815422DEAD box RNA helicase, putativeF:helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity;P:unknown;C:chloroplast;BOMFPAVO.I.C.G.S.X.
0.021e-344At4g03460827916ankyrin repeat family proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;MOFBPVAO.I.C.G.S.X.
0.036e-238At4g12790826891ATP-binding family proteinF:nucleotide binding, ATP binding;P:biological_process unknown;C:cellular_component unknown;MOFPAO.I.C.G.S.X.
0.036e-238At2g22090816744UBP1 interacting protein 1a (UBA1a)encodes a nuclear protein that binds to RNA with a specificity for oligouridylates in vitro. As with UBP1, transient overexpression of UBA1a in protoplasts increases the steady-state levels of reporter mRNAs in a promoter-dependent manner. Along with UBP1 and UBA2a, it may act as a component of a complex recognizing U-rich sequences in plant 3'-UTRs and contributing to the stabilization of mRNAs in the nucleus.O.I.C.G.S.X.
0.046e-238At1g79160844257unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.072e-550Gma.7350.1.S1_atGlycine maxBU547120--3e-5At5g54580RNA recognition motif (RRM)-containing proteinO.I.C.G.S.X.
0.047e+030Contig24062_atHordeum vulgareContig24062--9e+0At5g54580RNA recognition motif (RRM)-containing proteinO.I.C.G.S.X.
0.042e-344OsAffx.12889.1.S1_s_atOryza sativa---0O.I.C.G.S.X.
0.239e-857Ptp.6905.1.A1_s_atPopulus trichocarpaCV233868hypothetical protein-1e-7At5g54580RNA recognition motif (RRM)-containing proteinO.I.C.G.S.X.
0.079e-134Ta.26657.1.A1_atTriticum aestivumCD491487--3e-1At4g33610glycine-rich proteinO.I.C.G.S.X.
0.067e-5461610769_atVitis viniferaCF211187hypothetical protein LOC100254516-4e-4At5g54580RNA recognition motif (RRM)-containing proteinO.I.C.G.S.X.
0.034e-134Zm.4694.1.A1_atZea maysCF630383mRNA 3-UTR binding protein-8e-3At3g14100oligouridylate-binding protein, putativeO.I.C.G.S.X.



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