Homology analysis

Gene ID At5g54490
Functional description Encodes a PINOID (PID)-binding protein containing putative EF-hand calcium-binding motifs. The interaction is dependent on the presence of calcium. mRNA expression is up-regulated by auxin. Not a phosphorylation target of PID, likely acts upstream of PID to regulate the activity of this protein in response to changes in calcium levels.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.733e-40165At4g27280828836calcium-binding EF hand family proteinF:calcium ion binding;P:biological_process unknown;C:unknown;MPOFO.I.C.G.S.X.
0.017e-134At5g41770834182crooked neck protein, putative / cell cycle protein, putativeF:binding;P:RNA processing;C:intracellular;MFPOBAO.I.C.G.S.X.
0.027e-134At4g18770827611MYB98 (myb domain protein 98)MYB98 is a member of the R2R3-MYB gene family, the members of which likely encode transcription factors. Within an ovule, MYB98 is expressed exclusively in the synergid cells, and mutations in this gene affect the female gametophyte specifically. myb98 female gametophytes are affected in two unique features of the synergid cell, pollen tube guidance and the filiform apparatus, but are otherwise normal. This suggests that MYB98 controls the development of specific features within the synergid cell during female gametophyte development. MYB98 also is expressed in trichomes and endosperm. Homozygous myb98 mutants exhibit no sporophytic defects, including trichome and endosperm defects.O.I.C.G.S.X.
0.027e-134At2g28000817344CPN60A (CHAPERONIN-60ALPHA)Encodes chaperonin-60 alpha, a molecular chaperone involved in Rubisco folding. Mutants display aberrant chloroplast and embryo development.O.I.C.G.S.X.
0.013e+032At5g25930832662leucine-rich repeat family protein / protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane, membrane;MPOBFVAO.I.C.G.S.X.
0.033e+032At5g12840831124NF-YA1 (NUCLEAR FACTOR Y, SUBUNIT A1)Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues.O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.152e-240GmaAffx.68498.1.S1_atGlycine maxBU964633--1e-2At5g54490PBP1 (PINOID-BINDING PROTEIN 1)O.I.C.G.S.X.
0.036e+030Contig21126_atHordeum vulgareContig21126--3e-2At4g13345MEE55 (maternal effect embryo arrest 55)O.I.C.G.S.X.
0.054e-136Os.9073.1.S1_atOryza sativa---0O.I.C.G.S.X.
0.111e-654Ptp.7458.1.S1_atPopulus trichocarpaBU865438--5e-9At4g27280calcium-binding EF hand family proteinO.I.C.G.S.X.
0.043e+032TaAffx.31371.1.S1_atTriticum aestivumCA617016--3e+0At3g16120dynein light chain, putativeO.I.C.G.S.X.
0.104e-12691609188_atVitis viniferaCD715995hypothetical protein LOC100267424-2e-11At5g54490PBP1 (PINOID-BINDING PROTEIN 1)O.I.C.G.S.X.
0.043e-134Zm.9960.1.A1_atZea maysBM331809--1e+0At5g54490PBP1 (PINOID-BINDING PROTEIN 1)O.I.C.G.S.X.

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