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| Gene ID | At5g54490 |
| Gene name | PBP1 (PINOID-BINDING PROTEIN 1) |
| Functional description | Encodes a PINOID (PID)-binding protein containing putative EF-hand calcium-binding motifs. The interaction is dependent on the presence of calcium. mRNA expression is up-regulated by auxin. Not a phosphorylation target of PID, likely acts upstream of PID to regulate the activity of this protein in response to changes in calcium levels. |
| HF | Ev | BS | Gene ID | Repr. ID | Gene Name | Functional Description | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|
| 0.73 | 3e-40 | 165 | At4g27280 | 828836 | calcium-binding EF hand family protein | F:calcium ion binding;P:biological_process unknown;C:unknown;MPOF | O.I. | C.G. | S.X. | |
| 0.01 | 7e-1 | 34 | At5g41770 | 834182 | crooked neck protein, putative / cell cycle protein, putative | F:binding;P:RNA processing;C:intracellular;MFPOBA | O.I. | C.G. | S.X. | |
| 0.02 | 7e-1 | 34 | At4g18770 | 827611 | MYB98 (myb domain protein 98) | MYB98 is a member of the R2R3-MYB gene family, the members of which likely encode transcription factors. Within an ovule, MYB98 is expressed exclusively in the synergid cells, and mutations in this gene affect the female gametophyte specifically. myb98 female gametophytes are affected in two unique features of the synergid cell, pollen tube guidance and the filiform apparatus, but are otherwise normal. This suggests that MYB98 controls the development of specific features within the synergid cell during female gametophyte development. MYB98 also is expressed in trichomes and endosperm. Homozygous myb98 mutants exhibit no sporophytic defects, including trichome and endosperm defects. | O.I. | C.G. | S.X. | |
| 0.02 | 7e-1 | 34 | At2g28000 | 817344 | CPN60A (CHAPERONIN-60ALPHA) | Encodes chaperonin-60 alpha, a molecular chaperone involved in Rubisco folding. Mutants display aberrant chloroplast and embryo development. | O.I. | C.G. | S.X. | |
| 0.01 | 3e+0 | 32 | At5g25930 | 832662 | leucine-rich repeat family protein / protein kinase family protein | F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane, membrane;MPOBFVA | O.I. | C.G. | S.X. | |
| 0.03 | 3e+0 | 32 | At5g12840 | 831124 | NF-YA1 (NUCLEAR FACTOR Y, SUBUNIT A1) | Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues. | O.I. | C.G. | S.X. |
| HF | Ev | BS | Gene ID | Organism | Repr. ID | Gene Name | Functional Description | Ev | AGI code | Arabidopsis gene name | O.I. | C.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.15 | 2e-2 | 40 | GmaAffx.68498.1.S1_at | Glycine max | BU964633 | - | - | 1e-2 | At5g54490 | PBP1 (PINOID-BINDING PROTEIN 1) | O.I. | C.G. | S.X. | |
| 0.03 | 6e+0 | 30 | Contig21126_at | Hordeum vulgare | Contig21126 | - | - | 3e-2 | At4g13345 | MEE55 (maternal effect embryo arrest 55) | O.I. | C.G. | S.X. | |
| 0.05 | 4e-1 | 36 | Os.9073.1.S1_at | Oryza sativa | - | - | - | 0 | O.I. | C.G. | S.X. | |||
| 0.11 | 1e-6 | 54 | Ptp.7458.1.S1_at | Populus trichocarpa | BU865438 | - | - | 5e-9 | At4g27280 | calcium-binding EF hand family protein | O.I. | C.G. | S.X. | |
| 0.04 | 3e+0 | 32 | TaAffx.31371.1.S1_at | Triticum aestivum | CA617016 | - | - | 3e+0 | At3g16120 | dynein light chain, putative | O.I. | C.G. | S.X. | |
| 0.10 | 4e-12 | 69 | 1609188_at | Vitis vinifera | CD715995 | hypothetical protein LOC100267424 | - | 2e-11 | At5g54490 | PBP1 (PINOID-BINDING PROTEIN 1) | O.I. | C.G. | S.X. | |
| 0.04 | 3e-1 | 34 | Zm.9960.1.A1_at | Zea mays | BM331809 | - | - | 1e+0 | At5g54490 | PBP1 (PINOID-BINDING PROTEIN 1) | O.I. | C.G. | S.X. |
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