Homology analysis

Gene ID At5g52310
Gene name LTI78 (LOW-TEMPERATURE-INDUCED 78)
Functional description cold regulated gene, the 5' region of cor78 has cis-acting regulatory elements that can impart cold-regulated gene expression

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.464e-68260At5g52300835306LTI65 (LOW-TEMPERATURE-INDUCED 65)encodes a protein that is induced in expression in response to water deprivation such as cold, high-salt, and dessication. The response appears to be via abscisic acid. The promoter region contains two ABA-responsive elements (ABREs) that are required for the dehydration-responsive expression of rd29B as cis-acting elements. Protein is a member of a gene family with other members found plants, animals and fungi.O.I.C.G.S.X.
0.031e-656At4g25580828663stress-responsive protein-relatedF:unknown;P:unknown;C:cellular_component unknown;PMOFBVO.I.C.G.S.X.
0.013e-448At2g0381081490718S pre-ribosomal assembly protein gar2-relatedF:molecular_function unknown;P:N-terminal protein myristoylation;C:plasma membrane;BOMFPVAO.I.C.G.S.X.
0.011e-346At2g16920816195UBC23 (UBIQUITIN-CONJUGATING ENZYME 23)F:ubiquitin-protein ligase activity, small conjugating protein ligase activity;P:regulation of protein metabolic process, post-translational protein modification;C:cellular_component unknown;MOFBPVAO.I.C.G.S.X.
0.012e-242At5g10820830949integral membrane transporter family proteinF:transporter activity;P:transport;C:membrane;OPBMFO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.031e-140PsAffx.C5000204_atGlycine maxPsAffx.C5000204--6e-1At1g06475unknown proteinO.I.C.G.S.X.
0.025e-136Contig20415_atHordeum vulgareContig20415--1e+0At2g45420LBD18 (LOB DOMAIN-CONTAINING PROTEIN 18)O.I.C.G.S.X.
0.029e-344Os.9952.1.S1_atOryza sativa---0O.I.C.G.S.X.
0.022e-242PtpAffx.202688.1.S1_atPopulus trichocarpapmrna5363hypothetical protein-2e-4At3g51880HMGB1 (HIGH MOBILITY GROUP B 1)O.I.C.G.S.X.
0.027e-240Ta.3425.1.S1_a_atTriticum aestivumBG904860--3e-30At3g12390nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putativeO.I.C.G.S.X.
0.022e-2401615651_atVitis viniferaBM436482--4e-1At5g39720AIG2L (AVIRULENCE INDUCED GENE 2 LIKE PROTEIN)O.I.C.G.S.X.
0.015e-136Zm.1528.1.A1_atZea maysBM334837hypothetical protein LOC100191857 /// hypothetical protein LOC100278028-1e-1At4g01700chitinase, putativeO.I.C.G.S.X.



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