Homology analysis

Gene ID At5g52300
Functional description encodes a protein that is induced in expression in response to water deprivation such as cold, high-salt, and dessication. The response appears to be via abscisic acid. The promoter region contains two ABA-responsive elements (ABREs) that are required for the dehydration-responsive expression of rd29B as cis-acting elements. Protein is a member of a gene family with other members found plants, animals and fungi.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.423e-68260At5g52310835307LTI78 (LOW-TEMPERATURE-INDUCED 78)cold regulated gene, the 5' region of cor78 has cis-acting regulatory elements that can impart cold-regulated gene expressionO.I.C.G.S.X.
0.093e-22107At4g25580828663stress-responsive protein-relatedF:unknown;P:unknown;C:cellular_component unknown;PMOFBVO.I.C.G.S.X.
0.016e-240At3g01710821092-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFBVO.I.C.G.S.X.
0.016e-240At3g53110824477LOS4 (LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4)Encodes a putative DEAD-Box RNA Helicase and has RNA-dependent ATPase activity. Mutant is Sensitive to chilling stress and heat stress. Germination of the mutant is inhibited by ABA. LOS4 may be involved in temperature sensing. Is enriched in the nuclear envelope and also located in the cytoplasm. LOS4 is involved in export of poly A RNA.O.I.C.G.S.X.
0.016e-240At2g44710819079RNA recognition motif (RRM)-containing proteinF:RNA binding, nucleotide binding, nucleic acid binding;P:unknown;C:unknown;MOPBFVAO.I.C.G.S.X.
0.026e-240At1g0721083723230S ribosomal protein S18 familyF:structural constituent of ribosome;P:translation;C:ribosome, intracellular;BOPMFO.I.C.G.S.X.
0.012e-138At5g37830833761OXP1 (OXOPROLINASE 1)Encodes a 5-oxoprolinase that acts in the glutathione degradation pathway and in 5-oxoproline metabolism.O.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.023e-138GmaAffx.74590.1.S1_atGlycine maxBU764024--1e-2At3g58810MTPA2 (METAL TOLERANCE PROTEIN A2)O.I.C.G.S.X.
0.025e-136EBro08_SQ004_C01_atHordeum vulgareEBro08_SQ004_C01--4e-3At5g0480040S ribosomal protein S17 (RPS17D)O.I.C.G.S.X.
0.023e-242Os08g0548300Oryza sativaAK073266.1-Zn-finger, RING domain containing protein7e-1At1g21770-O.I.C.G.S.X.
0.021e+036PtpAffx.72546.1.S1_s_atPopulus trichocarpaCF231557hypothetical protein-5e-26At5g66540-O.I.C.G.S.X.
0.026e-240Ta.7837.3.A1_atTriticum aestivumCA634764--8e-1At4g38360unknown proteinO.I.C.G.S.X.
0.024e-3421618307_atVitis viniferaCB342985hypothetical protein LOC100266785-1e-44At3g10350anion-transporting ATPase family proteinO.I.C.G.S.X.
0.022e+034Zm.4770.1.A1_atZea maysAI739936--3e-1At5g49550unknown proteinO.I.C.G.S.X.

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