Homology analysis

Gene ID At5g48720
Functional description Encodes XRI1 (X-ray induced 1). Required for post-meiotic stages of pollen development and male and female meiosis. Maybe required for meiotic DNA repair. Inducible by X-ray. Homozygous xri1 mutants are sterile due to extensive chromosome fragmentation.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.011e-138At5g56290835728PEX5 (PEROXIN 5)Encodes the peroxisomal targeting signal type 1 receptor that facilitates peroxisomal protein translocation. It recognizes proteins with the PTS1 consensus sequence (tripeptide SKL or a conserved variant) at the extreme C terminus. The protein has several domains, including C-terminal tetratricopeptide repeat motifs which act in binding the C-terminal "SKL" targeting signal. The mechanism of transport has been worked out in other organisms: The receptor recognizes and binds cytosolic PTS1-containing proteins. The PEX5-PTS1 complex binds a PEX14/PEX13 receptor complex at the peroxisome membrane and is translocated into the peroxisome matrix in a process dependent on PEX2,PEX10, and PEX12. In the peroxisome matrix, PEX5 releases its cargo and is recycled to the cytosol in a process dependent on PEX1, PEX4, PEX6 and PEX22. It is also involved, in conjunction with PEX7, in PTS1- and PTS2-dependent peroxisomal protein import. RNAi experiments suggest that PEX5 is necessary for the maintenance of both glyoxysomal and leaf peroxisomal functions.O.I.C.G.S.X.
0.014e-136At3g28030822427UVH3 (ULTRAVIOLET HYPERSENSITIVE 3)Required for repair of pyrimidine-pyrimidinone (6-4) dimers.O.I.C.G.S.X.
0.012e+034At4g31615829289DNA binding / transcription factorF:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;PBO.I.C.G.S.X.
0.022e+034At2g22250816758aminotransferase class I and II family proteinF:L-aspartate:2-oxoglutarate aminotransferase activity, pyridoxal phosphate binding, transferase activity, transferring nitrogenous groups, catalytic activity;P:embryonic development ending in seed dormancy;C:chloroplast;BOPAMFO.I.C.G.S.X.
0.022e+034At1g68840843216RAV2 (REGULATOR OF THE ATPASE OF THE VACUOLAR MEMBRANE)Rav2 is part of a complex that has been named `regulator of the (H+)-ATPase of the vacuolar and endosomal membranes' (RAVE)O.I.C.G.S.X.
0.016e+032At5g15710831425F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.S.X.
0.016e+032At5g48550834911F-box family protein-relatedF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.181e-757GmaAffx.29651.1.A1_s_atGlycine maxCD412244--5e-8At5g48720XRI1 (X-RAY INDUCED TRANSCRIPT 1)O.I.C.G.S.X.
0.028e-134Contig15712_s_atHordeum vulgareContig15712--7e-3At1g22360AtUGT85A2 (UDP-glucosyl transferase 85A2)O.I.C.G.S.X.
0.038e-136Os.22825.1.A1_atOryza sativa---0O.I.C.G.S.X.
0.132e-1067PtpAffx.212006.1.S1_atPopulus trichocarpapmrna23577--1e-10At5g48720XRI1 (X-RAY INDUCED TRANSCRIPT 1)O.I.C.G.S.X.
0.031e-138Ta.4682.1.A1_atTriticum aestivumBJ270018--1e-1At5g48720XRI1 (X-RAY INDUCED TRANSCRIPT 1)O.I.C.G.S.X.
0.043e-2381614165_x_atVitis viniferaAY427086.1--2e+0At5g63270nitrate-responsive NOI protein, putativeO.I.C.G.S.X.
0.023e+032Zm.9811.1.A1_atZea maysBM351496--1e+0At3g50250unknown proteinO.I.C.G.S.X.

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