Homology analysis

Gene ID At5g48450
Gene name sks3 (SKU5 Similar 3)
Functional description Encodes a protein with two DUF26 domains and a signal peptide for secretion. The protein is transported to the apoplast when it is expressed as a GFP fusion protein.

Click gene/probe ID to show a list of genes that are homologous to the gene.

Paralogous genes

HFEvBSGene IDRepr. IDGene NameFunctional DescriptionO.I.C.G.S.X.Other DB
0.093e-25117At4g12420826851SKU5Encodes a protein of unknown function involved in directed root tip growth. It is a member of 19-member gene family and is distantly related structurally to the multiple-copper oxidases ascorbate oxidase and laccase, though it lacks the copper-binding domains. The protein is glycosylated and GPI-anchored. It is localized to the plasma membrane and the cell wall. The gene is expressed most strongly in expanding tissues.O.I.C.G.S.X.
0.034e-963At5g66920836826sks17 (SKU5 Similar 17)F:oxidoreductase activity, copper ion binding;P:unknown;C:cell wall, plant-type cell wall;FBPMOAO.I.C.G.S.X.
0.043e-654At4g25240828627SKS1 (SKU5 SIMILAR 1)Encodes GPI-anchored SKU5-like protein.O.I.C.G.S.X.
0.022e-448At3g13390820539sks11 (SKU5 Similar 11)F:oxidoreductase activity, copper ion binding;P:unknown;C:endomembrane system;FBPMOAO.I.C.G.S.X.
0.022e-448At3g13400820540sks13 (SKU5 Similar 13)F:oxidoreductase activity, copper ion binding;P:unknown;C:endomembrane system;FBPMOAO.I.C.G.S.X.
0.023e-344At1g21850838787sks8 (SKU5 Similar 8)F:oxidoreductase activity, copper ion binding;P:unknown;C:endomembrane system;FBPMOAO.I.C.G.S.X.
0.111e-242At5g51480835222SKS2 (SKU5 SIMILAR 2)F:oxidoreductase activity, copper ion binding;P:unknown;C:anchored to plasma membrane, plasma membrane, anchored to membrane;FBPMOAO.I.C.G.S.X.
0.031e-242At4g38420829999sks9 (SKU5 Similar 9)F:oxidoreductase activity, copper ion binding;P:unknown;C:plant-type cell wall;FBPMOAO.I.C.G.S.X.
0.031e-242At4g22010828290sks4 (SKU5 Similar 4)F:oxidoreductase activity, copper ion binding;P:unknown;C:membrane, plant-type cell wall;FBPMOAO.I.C.G.S.X.

Orthologous genes

HFEvBSGene IDOrganismRepr. IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameO.I.C.G.S.X.Other DB
0.069e-2099Gma.6199.1.S1_atGlycine maxBQ612015--5e-27At5g66920sks17 (SKU5 Similar 17)O.I.C.G.S.X.
0.023e-240Contig6004_x_atHordeum vulgareContig6004--1e+0At4g01640-O.I.C.G.S.X.
0.111e-450Os06g0104300Oryza sativaAK102494.1-Pectinesterase (EC 3.1.1.11) (Fragment)6e-18At4g25240SKS1 (SKU5 SIMILAR 1)O.I.C.G.S.X.
0.302e-33145PtpAffx.15823.1.A1_atPopulus trichocarpaCV268506hypothetical protein-7e-34At5g48450sks3 (SKU5 Similar 3)O.I.C.G.S.X.
0.023e+034Ta.26463.1.A1_atTriticum aestivumCD490944--1e+0At2g12945unknown proteinO.I.C.G.S.X.
0.074e-6521621115_atVitis viniferaCF609165hypothetical protein LOC100262548-1e-13At4g12420SKU5O.I.C.G.S.X.
0.056e-1271Zm.6577.1.A1_atZea maysAI714833--3e-13At5g51480SKS2 (SKU5 SIMILAR 2)O.I.C.G.S.X.



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